CF835815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.426e-31 Identity = 78/166 (46.99%), Postives = 99/166 (59.64%), Query Frame = 2 Query: 98 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKS--NRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 VASIV+ FD + ++ A+C K+FYT DAF+ AA A+P F + G KRE+AAF A +HET C+ EE N + + YC Q+ Q+PC GK YYGRGPIQ++ N NYG AG+AIG + L P+ VA D VSFKTA WFWMT P Sbjct: 79 VASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYC-VQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSP 243
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.100e-30 Identity = 71/163 (43.56%), Postives = 96/163 (58.90%), Query Frame = 2 Query: 104 SIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 S++T + FD + ++ C + FYT DAF+ AAK++P F + G KRE+AAF A +HET CY E+N ++ YC + + YPC PGK Y+GRGP+QLT N NYG G+AIG D L P+ +A DP +SFK+A WFWMT P Sbjct: 74 SLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YC-QWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSP 234
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.452e-30 Identity = 71/161 (44.10%), Postives = 93/161 (57.76%), Query Frame = 2 Query: 95 NVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT 532 +V +V FD +K + CAG FYT DAF+ AA+++ FG+ G K+E+AAF A +HET C++ E N YC K +PC PGK YYGRGPIQLT N NYG AG+AI D + P+ ++ +P VSFKTA+WFWMT Sbjct: 79 DVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSP--KDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMT 237
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 5.462e-30 Identity = 65/145 (44.83%), Postives = 85/145 (58.62%), Query Frame = 2 Query: 155 SCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 +C + FYT DAF+ AA+++P F + G KREIAAF A +HET CY E+N + YC + YPC PGK Y+GRGP+QL+ N NYG G+AIG D L P+ ++ DP +SFK+A WFWMT P Sbjct: 72 ACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYC-ASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSP 215
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.462e-30 Identity = 65/145 (44.83%), Postives = 85/145 (58.62%), Query Frame = 2 Query: 155 SCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 +C + FYT DAF+ AA+++P F + G KREIAAF A +HET CY E+N + YC + YPC PGK Y+GRGP+QL+ N NYG G+AIG D L P+ ++ DP +SFK+A WFWMT P Sbjct: 94 ACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYC-ASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSP 237
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 9.316e-30 Identity = 77/167 (46.11%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 98 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS--GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNR--YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 VASIV+ FD + ++ A+C +FYT DAF+ AA A+P F + G + +KRE+AAF A +HET C+ EE + YC +Q+ Q+PC GK YYGRGPIQL+ N NYG AG+AIG D L P+ VA D VSF TA WFWMT P Sbjct: 81 VASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYC-QQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSP 246
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.217e-29 Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 2 Query: 95 NVASIVTPQFFDGIKNQAAAS-CAGK-SFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 ++ +++ FD + N + C GK +FY+ +AF++AA ++P FG+ G KREIAAFFA +HET C++ E YC N Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA D ++SFK+A+WFWMT P Sbjct: 65 DLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSN-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSP 229
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.075e-29 Identity = 77/186 (41.40%), Postives = 102/186 (54.84%), Query Frame = 2 Query: 20 MKKNIVTFALVGILALAFPTKVMCQNVASIVTPQFFD---GIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET---------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGF--DGLRAPETVAKDPVVSFKTALWFWMT 532 MK NIV+ + L F T + QN SIVT + F+ +N A C K FYT DAF+ AA ++P FG+ G K+EIAAFF +HET G C++ +I++S+RY YGRGPIQLT NY AG+ IG D + P+ VA DP++SF+TA+WFWMT Sbjct: 1 MKFNIVSPVALSCLFFLFLTGTLAQNAGSIVTRELFEQMLSFRNNDA--CPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGGSAGTFTGGYCFVRQIDQSDRY----------------YGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMT 168
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.711e-29 Identity = 79/168 (47.02%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 56 ILALAFP-----TKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHLCYIEEINKSNRYC--DEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT 532 +LAL+F T + QNV SIVT FD +KN+ A C FYT DAF+ AA ++P FG+ G K+EIAAFF +HET + + YC E N+ G YYGRGPIQLTG NY AGKAI D + P+ VA D VSFKTA+WFWMT Sbjct: 7 VLALSFVVFLFLTGTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTLSPDGPYAGGYCFLREGNQM-----GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMT 169
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.711e-29 Identity = 77/186 (41.40%), Postives = 102/186 (54.84%), Query Frame = 2 Query: 20 MKKNIVTFALVGILALAFPTKVMCQNVASIVTPQFFD---GIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET---------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGF--DGLRAPETVAKDPVVSFKTALWFWMT 532 MK NIV+ + L F T + QN SIVT + F+ +N A C K FYT DAF+ AA ++P FG+ G K+EIAAFF +HET G C++++I +S+RY YGRGPIQLT NY AG+ IG + + P+ VA DP++SFKTA+WFWMT Sbjct: 1 MKFNIVSPVALSCLFFLFLTGTLAQNAGSIVTRELFEQMLSFRNNDA--CPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGGSAGTFTGGYCFVKQIEQSDRY----------------YGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMT 168 The following BLAST results are available for this feature:
BLAST of CF835815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835815 ID=CF835815; Name=CF835815; organism=Citrus sinensis; type=EST; length=574bpback to top |