CF835815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.540e-29 Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 95 NVASIVTPQFFDGIKNQAAAS-CAGKS-FYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 ++ +++ FD + N + C GK+ FY+ +AF+ AA ++P FG+ G KREIAAF A +HET C++ E YC + Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA DPV+SFK+A+WFWMT P Sbjct: 71 DLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSP 235
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.540e-29 Identity = 71/157 (45.22%), Postives = 94/157 (59.87%), Query Frame = 2 Query: 98 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 VAS+VT F+ + ++ A+C + FY AF+ AA A+P F + G + KRE+AAF A +H T CY E ++ +C N ++PC PGK Y+ RGP+Q+ N NYGAAG+AIG D L PE VA DP V+FKTALW WMT P Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFC-VPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSP 252
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.540e-29 Identity = 71/157 (45.22%), Postives = 94/157 (59.87%), Query Frame = 2 Query: 98 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 VAS+VT F+ + ++ A+C + FY AF+ AA A+P F + G + KRE+AAF A +H T CY E ++ +C N ++PC PGK Y+ RGP+Q+ N NYGAAG+AIG D L PE VA DP V+FKTALW WMT P Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFC-VPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSP 252
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.540e-29 Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 2 Query: 95 NVASIVTPQFFDGIKNQAAAS-CAGK-SFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 ++ +++ FD + N + C GK +FY+ +AF++AA ++P FG+ G KREIAAFFA +HET C++ E YC + Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA D V+SFK+A+WFWMT P Sbjct: 67 DLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSP 231
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.757e-28 Identity = 74/178 (41.57%), Postives = 99/178 (55.62%), Query Frame = 2 Query: 44 ALVGILALAFPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS--GSPEVSKREIAAFFAHVTHETGH------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT 532 A +LA+A + Q V S++T F+ + N+ + C + FYT DAF+ AA ++P FG+ GS E+ +RE+AAFF +HET C+ EEINK+ YYGRGPIQLTG NY AAG A+G D + P+ V+ D VVSFKTA+WFWMT Sbjct: 15 AAASLLAVA-ASGAAAQGVGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGSSDQFQWGYCFKEEINKAT--------------SPPYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMT 177
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.757e-28 Identity = 68/166 (40.96%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 95 NVASIVTPQFFDGIKNQAAAS-CAGKS-FYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 ++ +++ FD + N + C GK+ FY+ +AF++AA ++P FG+ G KREIAAF A +HET C++ E YC + Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA D V+SFK+A+WFWMT P Sbjct: 67 DLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSP 231
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.112e-28 Identity = 73/170 (42.94%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 65 LAFPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET------------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT 532 L F T Q+V +IVT F+ +KN+ C K FYT DAF+ AA ++P FG+ G K+EIAAFF +HET G C++ E N+ G +YGRGPIQLTG NY AG+AIG D + P+ VA D VSFKTA+WFWMT Sbjct: 8 LLFLTGSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADGPFAGGYCFVREGNQM---------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMT 162
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.112e-28 Identity = 67/147 (45.58%), Postives = 85/147 (57.82%), Query Frame = 2 Query: 134 IKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQ-YPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWM 529 + N+ SC GK FYT DA+ A + YP FG +G + KRE+AAFFA + ET C + E+N ++ YCD + K YPCV YYGRGP+QL N NYG G +G + L PE VA DPV+SF+ ALWFWM Sbjct: 76 LPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVAD--YYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWM 220
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 1.942e-27 Identity = 71/164 (43.29%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 98 VASIVTPQFFDGI-KNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 ++ I+ FD + K + A C FYT +AF++AAK +P FG+ G + KREIAAF +HET CY++EIN YCD + Y CV GK Y GRGPIQL+ N NYG G + L+ PE V DPV+SFKTA+WFWM P Sbjct: 89 LSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSN-YQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSP 250
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.148e-26 Identity = 69/176 (39.20%), Postives = 94/176 (53.41%), Query Frame = 2 Query: 44 ALVGILALAFPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVSKR-EIAAFFAHVTHET-----------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT 532 AL + F T + Q + SIVT F+ +KN+ C FYT DAF+ AA ++P FG+ + ++R EIAAFF +HET G C++ + ++S+RY YGRGPIQLT NY AG AIG + + P+ VA D +SFKTA+WFWMT Sbjct: 9 ALFCCVFFLFLTGSLAQGIGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDRY----------------YGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMT 168 The following BLAST results are available for this feature:
BLAST of CF835815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835815 ID=CF835815; Name=CF835815; organism=Citrus sinensis; type=EST; length=574bpback to top |