CF835815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.663e-26 Identity = 68/167 (40.72%), Postives = 89/167 (53.29%), Query Frame = 2 Query: 71 FPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHET-----------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT 532 F T + Q + SIVT F+ +KN+ C FYT DAF+ AA ++P FG SG ++EIAAFF +HET G C++ + ++S+RY YGRGPIQLT NY AG AI D + P+ VA D +SFKTA+WFWMT Sbjct: 18 FLTGSLAQGIGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDRY----------------YGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMT 168
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 3.663e-26 Identity = 66/156 (42.31%), Postives = 91/156 (58.33%), Query Frame = 2 Query: 107 IVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH------------LCYIEEINKS-NRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT 532 +VT FD + + C + FY+ +FL AA+++P FG+ G KRE+AAF AH++ T LC+I + N +C + +PC GK Y RGPIQLT N NYG AG+AIG D ++ P+ V KDP++SFKTALWFWM+ Sbjct: 133 VVTEPLFDQMFSHRK-DCPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVENPHAWGLCHINTTTVTENDFCTSSD--WPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMS 285
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.539e-24 Identity = 67/152 (44.08%), Postives = 91/152 (59.87%), Query Frame = 2 Query: 98 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET-GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 V SI+T F+ + ++ C G +FYT DAF+ AA +P+FG+ G+ E +RE+AAFF +HET G + + YC N+ P P YYGRGPIQLT NY AG A+G D + P+ V+ DPVV+F+TA+WFWMT P Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYC-RVNEITPSDPP--YYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSP 174
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.625e-24 Identity = 61/127 (48.03%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 167 KSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 + FYT DAF+ AAK++P F + GS +V KRE+AAF A +HET + + + Y Y+GRGPIQ++ N NYGAAGKAIG D LR P+ V D V FKTALWFWMT P Sbjct: 17 RGFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHET-----------TGGWPTAPDGPYELGSTSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSP 132
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: IAMY_COILA (Alpha-amylase inhibitor/endochitinase (Fragments) OS=Coix lachryma-jobi PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 47/85 (55.29%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 269 FAHVTHETGHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWF 523 FAHVTHETG+ N YCD Q PC GK YYGRGPIQ++ N NYG AG+AIG DGL P+ VA+D + +KTAL F Sbjct: 24 FAHVTHETGN----------NAYCDPSKTQKPCAAGKKYYGRGPIQISXNYNYGPAGRAIGMDGLGNPDRVAQDALDDYKTALXF 98
BLAST of CF835815 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.000e-15 Identity = 53/142 (37.32%), Postives = 68/142 (47.89%), Query Frame = 2 Query: 122 FFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 544 F D +K + C FYT +AF++AAK +P FG+ G + KREIAAF +HET N +P G Y G + N NYG G + L+ PE V DP ++FKTALWFWMT P Sbjct: 94 FDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHET-------------------NGWWPAAQGD-QYDWGYCHM--NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSP 213 The following BLAST results are available for this feature:
BLAST of CF835815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835815 ID=CF835815; Name=CF835815; organism=Citrus sinensis; type=EST; length=574bpback to top |