CF836108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836108 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.347e-51 Identity = 102/155 (65.81%), Postives = 122/155 (78.71%), Query Frame = 3 Query: 78 GLKAGATPARVV--GSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 536 GLKAGA+ + V G++ K +A+ V +L++KA+LKDVG +EVLLGGDDGSLAF+P +FSVS+GEKI FKNNAGFPHNVVFDEDEIP+GVD SKISMS EDLLN GETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN Sbjct: 16 GLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATAVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170
BLAST of CF836108 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 8.730e-51 Identity = 101/153 (66.01%), Postives = 114/153 (74.51%), Query Frame = 3 Query: 78 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 536 GLKAG+ V ++ K SAS +P+LSIKA++KDVG I+VLLG DDGSLAFVPS FS+S GEKIVFKNNAGFPHN+VFDED IPSGVD SKISMS EDLLN GET+ V L+ KG YSFYCSPHQGAGMVG+VTVN Sbjct: 16 GLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAASAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168
BLAST of CF836108 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 3.317e-50 Identity = 103/157 (65.61%), Postives = 118/157 (75.16%), Query Frame = 3 Query: 78 GLKAGA----TPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 536 GLKA T A+++ +T +AVP+LS+KA+LK+VG +EVLLGG DGSLAF+P FSV+SGE+IVFKNNAGFPHNVVFDEDEIPSGVD +KISMS EDLLN PGETY VTLTEKGTY FYCSPHQGAGMVG+VTVN Sbjct: 17 GLKASGSIKPTTAKIIPTT-----TAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168
BLAST of CF836108 vs. ExPASy Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48 Identity = 97/153 (63.40%), Postives = 114/153 (74.51%), Query Frame = 3 Query: 78 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 536 GLKA + V ++ K SAS +P+LSIKA+LK+VG ++VLLG DDGSLAFVPS FSV +GEKIVFKNNAGFPHNV+FDED +PSGVDVSKISMS EDLLN GET+ V L++KG Y+FYCSPHQGAGMVG+V VN Sbjct: 16 GLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAASAMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168
BLAST of CF836108 vs. ExPASy Swiss-Prot
Match: PLAS_SILPR (Plastocyanin, chloroplastic OS=Silene pratensis GN=PETE PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.648e-47 Identity = 97/153 (63.40%), Postives = 111/153 (72.55%), Query Frame = 3 Query: 78 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 536 GLKA +T +T+K A A P++SIKA+LKDVG EVLLG DG LAFVPS S++SGEKI FKNNAGFPHNVVFDEDE+P+GVDV+KISM EDLLN PGE Y+VTLTEKGTY FYC+PH GAGMVG+VTVN Sbjct: 17 GLKASSTTR---AATVKV-AVATPRMSIKASLKDVGVVVAATAAAGILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165
BLAST of CF836108 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.304e-46 Identity = 94/153 (61.44%), Postives = 112/153 (73.20%), Query Frame = 3 Query: 78 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 536 GLKA + ++ +A A PKL++K++LK+ G IEVLLGG DGSLAF+P+ FS++ GEKIVFKNNAG+PHNVVFDEDEIPSGVDV+KISM +DLLNG GETY V LTE GTYSFYC+PHQGAGMVG+VTVN Sbjct: 16 GLKASTIKSSAT-VRIQTAAVASPKLTVKSSLKNFGVAAVAAAASIALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDVAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167
BLAST of CF836108 vs. ExPASy Swiss-Prot
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum GN=PETE PE=4 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.455e-46 Identity = 94/153 (61.44%), Postives = 104/153 (67.97%), Query Frame = 3 Query: 78 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 536 GLK A + + S S P+L ++A+LKD G +EVLLG DG LAFVPSS VS+GE IVFKNNAGFPHNVVFDEDEIP+GVD SKISM EDLLN PGETY+V L KGTY FYCSPHQGAGMVGQVTVN Sbjct: 16 GLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAASAVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168
BLAST of CF836108 vs. ExPASy Swiss-Prot
Match: PLAS2_TOBAC (Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.481e-45 Identity = 85/99 (85.86%), Postives = 93/99 (93.94%), Query Frame = 3 Query: 240 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 536 IEVLLG DDG LAFVP +FSVS+GEKI FKNNAGFPHNVVFDEDEIP+GVD SKISMS EDLLNGPGETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN Sbjct: 1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99
BLAST of CF836108 vs. ExPASy Swiss-Prot
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana GN=PETE PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 5.481e-45 Identity = 95/155 (61.29%), Postives = 108/155 (69.68%), Query Frame = 3 Query: 78 GLKAGATPARVVGSTMKASASAV---PKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 533 GLK + ST+ S SA PKL++K++LKD G +EVLLG DDGSLAFVPS F+V+ GEKIVFKNNAGFPHNVVFDEDEIPSGVD SKISM LLNG GETY VTLTE G+Y FYC+PHQGAGMVG++TV Sbjct: 16 GLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170
BLAST of CF836108 vs. ExPASy Swiss-Prot
Match: PLAS_RUMOB (Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.595e-44 Identity = 83/98 (84.69%), Postives = 93/98 (94.90%), Query Frame = 3 Query: 240 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 533 IE+ LGGDDG+LAFVP SF+V++GEKIVFKNNAGFPHN+VFDEDE+P+GVD SKISMS EDLLN PGETYAVTL+EKGTYSFYCSPHQGAGMVG+VTV Sbjct: 1 IEIKLGGDDGALAFVPGSFTVAAGEKIVFKNNAGFPHNIVFDEDEVPAGVDASKISMSEEDLLNAPGETYAVTLSEKGTYSFYCSPHQGAGMVGKVTV 98 The following BLAST results are available for this feature:
BLAST of CF836108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836108 ID=CF836108; Name=CF836108; organism=Citrus sinensis; type=EST; length=724bpback to top |