CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_HUMAN (Malate dehydrogenase, cytoplasmic OS=Homo sapiens GN=MDH1 PE=1 SV=4) HSP 1 Score: 136.732 bits (343), Expect = 9.676e-32 Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDG-SYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 +KDD+WL GEF+T VQQRG A+IKARK CDH+RD FGTPEG +VSMGV DG SY VP L+YSFPV +N W V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 213 LKDDSWLKGEFVTTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_XENTR (Malate dehydrogenase, cytoplasmic OS=Xenopus tropicalis GN=mdh1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.815e-31 Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDG-SYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 VK+D WL GEFIT VQQRG A+IKARK CDH+RD FGTP+G +VSMGV DG SY +P L+YSFP+T +N W IV+GL I++FSR+K+DLTA+EL EEK Sbjct: 213 VKNDDWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPDGQFVSMGVISDGNSYGIPEDLMYSFPLTIKNKTWKIVEGLPINDFSREKMDLTAKELHEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_MOUSE (Malate dehydrogenase, cytoplasmic OS=Mus musculus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 6.272e-31 Identity = 68/112 (60.71%), Postives = 81/112 (72.32%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDG-SYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 +KDD+WL GEFIT VQQRG A+IKARK DHIRD FGTPEG +VSMGV DG SY VP L+YSFPV +N W V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 213 LKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAIADHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_RAT (Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 8.192e-31 Identity = 68/112 (60.71%), Postives = 81/112 (72.32%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDG-SYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 +KDD+WL GEFIT VQQRG A+IKARK DHIRD FGTPEG +VSMGV DG SY VP L+YSFPV +N W V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 213 LKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAISDHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_DICDI (Probable malate dehydrogenase 3 OS=Dictyostelium discoideum GN=mdhC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.192e-31 Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 +KD+ WL GEFI+ VQ+RG A+I ARK DH+ DWV GT EG +VSMGVY DGSY VP GLI+SFPV C NG++TIVQGL +D+ S+ ++LT EEL EK Sbjct: 214 IKDEKWLQGEFISTVQKRGAAVIAARKLSSAASAAKAITDHMHDWVLGTAEGEYVSMGVYSDGSYGVPEGLIFSFPVKCANGKYTIVQGLQMDDLSKNLINLTTEELVAEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_XENLA (Malate dehydrogenase, cytoplasmic OS=Xenopus laevis GN=mdh1 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.825e-30 Identity = 66/112 (58.93%), Postives = 81/112 (72.32%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDG-SYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 VK+D WL G FIT VQQRG A+IKARK CDH+RD FGTPEG +VSMGV DG SY VP L+YSFP+T +N W IV+GL I++FSR+K+D+TA+EL +EK Sbjct: 213 VKNDDWLKGGFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGQFVSMGVISDGNSYGVPEDLMYSFPLTIKNKTWKIVEGLCINDFSREKMDITAKELQDEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_CHICK (Malate dehydrogenase, cytoplasmic OS=Gallus gallus GN=MDH1 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.935e-30 Identity = 64/112 (57.14%), Postives = 80/112 (71.43%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDG-SYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 +KDD+WL G+FI VQQRG A+IKARK CDH+RD FGTP G +VSMGV DG SY VP L+YSFPV ++ W V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 213 IKDDSWLKGDFILTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPAGEFVSMGVISDGNSYGVPEDLLYSFPVVIKDKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_HALHL (Malate dehydrogenase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=mdh PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.057e-30 Identity = 63/109 (57.80%), Postives = 75/109 (68.81%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 + AW+ FI VQQRG AIIKAR A DH+RDW GTPEG W SM V DGSY + AGLIYSFPVTCR G++ IV GLS+D+FSR ++D TA EL+EE+ Sbjct: 210 EHAWVKDTFIPTVQQRGAAIIKARGASSAASAASAAIDHMRDWALGTPEGEWTSMAVPSDGSYGIEAGLIYSFPVTCRGGDYKIVSGLSVDDFSRARMDQTAAELAEER 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHA_DICDI (Probable malate dehydrogenase 1 OS=Dictyostelium discoideum GN=mdhA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.183e-29 Identity = 61/111 (54.95%), Postives = 74/111 (66.67%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V DD WLN +FI VQ RG +I ARK H+RDW+ GT +G VSM VY DGSY VP GLI+SFPVTC NG+WTIVQGL I+ +++K+D T +EL EEK Sbjct: 273 VNDDKWLNEQFIPLVQNRGATVIAARKLSSAASAANAIVGHVRDWLLGTKDGEHVSMAVYSDGSYNVPKGLIFSFPVTCHNGQWTIVQGLKINSSTQQKIDATIKELQEEK 383
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ALCBS (Malate dehydrogenase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mdh PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.545e-29 Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = -2 Query: 310 WLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 627 W ++I VQQRG AIIKAR A DH+R W GT EG WVSMG+Y DGSY + GLIYSFP TC+NG+WTIVQGL +++FSR K+ T +EL+EE+ Sbjct: 215 WYENDYIPTVQQRGAAIIKARGASSAASAANAAVDHMRSWALGTDEGDWVSMGIYSDGSYGIQEGLIYSFPCTCKNGDWTIVQGLEVNDFSRGKMQATEQELAEER 320 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |