CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.900e-44 Identity = 87/111 (78.38%), Postives = 92/111 (82.88%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V DDAWLNGEFI+ VQQRG AIIKARK ACDHIRDWV GTP+G +VSMGVY DGSY VP+GLIYSFPVTC NGEW IVQGLSIDEFSRKKLDLTAEEL+EEK Sbjct: 214 VSDDAWLNGEFISTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELTEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.880e-43 Identity = 86/111 (77.48%), Postives = 91/111 (81.98%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 VK+D WLNGEFI+ VQQRG AIIKARK ACDHIRDWV GTPEG +VSMGVY DGSY VPAGLIYSFPVTCRNGEWTIVQGL ID+ SRKK+DLTAEEL EEK Sbjct: 214 VKNDEWLNGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 1.880e-43 Identity = 85/111 (76.58%), Postives = 92/111 (82.88%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 VKDDAWL+GEFI+ VQQRG AIIKARK ACDHIRDWV GTPEG +VSMGVY DGSY VP+GLIYSFPVTCRNG+W+IVQGL IDE SRKK+DLTAEEL EEK Sbjct: 214 VKDDAWLDGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIVQGLPIDEVSRKKMDLTAEELKEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.143e-43 Identity = 84/111 (75.68%), Postives = 88/111 (79.28%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V DDAWLNGEFIT VQQRG AIIKARK ACDHI DWV GTPEG WVSMGVY DGSY VPAG+IYSFPVTC+NGEWTIVQGL ID+ SRKK+D TA EL EEK Sbjct: 214 VADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIHDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKNGEWTIVQGLPIDDDSRKKMDATAAELVEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.714e-42 Identity = 83/112 (74.11%), Postives = 88/112 (78.57%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 V DDAWLNGEFIT VQQRG AIIKARK ACDHIRDWV GTPEG WVSMGVY DGSY VPAG+IYSFPVTC++GEW IVQGL IDE SR+K+D T EL EEKA Sbjct: 214 VADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKDGEWKIVQGLPIDEVSRQKMDATGAELVEEKA 325
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 7.897e-42 Identity = 83/111 (74.77%), Postives = 88/111 (79.28%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V DD WLNGEFIT VQQRG AIIKARK ACDHIRDWV GTPEG +VSMGVY DGSY VP+GLIYSFPVTC GEW IVQGL IDEFSRKK+D TA+EL+EEK Sbjct: 214 VSDDEWLNGEFITTVQQRGAAIIKARKFSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGEWKIVQGLPIDEFSRKKMDATAQELTEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 1.031e-41 Identity = 84/111 (75.68%), Postives = 88/111 (79.28%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V DD WLN EFI+ VQQRG AIIKARK ACDHIRDWV GTPEG +VSMGVY DGSY VPAGLIYSFPVTC GEWTIVQGL IDEFSRKK+D TA+ELSEEK Sbjct: 214 VADDEWLNTEFISTVQQRGAAIIKARKQSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPAGLIYSFPVTCSGGEWTIVQGLPIDEFSRKKMDATAQELSEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_PIG (Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4) HSP 1 Score: 139.428 bits (350), Expect = 1.493e-32 Identity = 69/112 (61.61%), Postives = 84/112 (75.00%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDG-SYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 VKDD+WL GEFIT VQQRG A+IKARK CDH+RD FGTPEG +VSMG+ DG SY VP L+YSFPVT ++ W IV+GL I++FSR+K+DLTA+EL+EEK Sbjct: 213 VKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_FELCA (Malate dehydrogenase, cytoplasmic OS=Felis catus GN=MDH1 PE=2 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.493e-32 Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGS-YKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 +KDD+WL GEFIT VQQRG A+IKARK CDH+RD FGTPEG +VSMG+ DG+ Y VP L+YSFPVT +N W +V+GL+I++FSR+K+DLTA+EL+EEK Sbjct: 213 LKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNPYGVPDDLLYSFPVTIKNKTWKVVEGLTINDFSREKMDLTAKELAEEK 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHC_BOVIN (Malate dehydrogenase, cytoplasmic OS=Bos taurus GN=MDH1 PE=2 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 5.673e-32 Identity = 66/112 (58.93%), Postives = 84/112 (75.00%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDG-SYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 +KDD+WL GEFIT VQQRG A+IKARK CDH+RD FGTPEG +VSMG+ DG SY +P L+YSFPVT ++ W +V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 213 LKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGIPDDLLYSFPVTIKDKTWKVVEGLPINDFSREKMDLTAKELAEEK 324 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |