CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_XANAC (Malate dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=mdh PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.287e-23 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D W FI V +RG AII+AR A DHIRDWV GT G WV+MGV DGSY +P G+++ FPVT NG++TIV+ L ID+FS+K +D T EL EE++ Sbjct: 211 INDQEWNASTFIPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-SGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGKYTIVKDLPIDDFSQKYIDKTLAELEEERS 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_CORJK (Malate dehydrogenase OS=Corynebacterium jeikeium (strain K411) GN=mdh PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.287e-23 Identity = 53/110 (48.18%), Postives = 68/110 (61.82%), Query Frame = -2 Query: 307 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 636 D AW+N EFI V +RG II+ R A DH+RDWV GT EG WVS+ + DGSY +P GL++SFP +GEW IVQGL I ++++D +EL EEKA Sbjct: 213 DAAWVNDEFIPRVAKRGAEIIEVRGRSSAASAASAALDHMRDWVNGTAEGDWVSVALPSDGSYGIPEGLVFSFPCRSVDGEWEIVQGLEISPAQQERIDANIKELQEEKA 322
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_POLNS (Malate dehydrogenase OS=Polynucleobacter necessarius (strain STIR1) GN=mdh PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 8.211e-23 Identity = 54/112 (48.21%), Postives = 69/112 (61.61%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D AW FI V +RG AII+AR A DHI DWV GT G WV+MG+ G Y +PA +IY FPV C NGE+ +++GL IDEFSR+++ T EL EE+A Sbjct: 212 INDAAWNKDVFIPTVGKRGAAIIEARGLSSAASAANAAIDHIHDWVLGT-NGKWVTMGIPSKGEYDIPAEVIYGFPVVCENGEYKMIEGLEIDEFSRERMTHTLNELLEEQA 322
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_JANMA (Malate dehydrogenase OS=Janthinobacterium sp. (strain Marseille) GN=mdh PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.072e-22 Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D+ W F+ V +RG AII AR A DH+RDWV GT G WV+MG+ DGSY +P I+ FPVT NGE+ IVQGL ID FS+++++LT +EL EE+ Sbjct: 212 INDEVWNKDVFLPTVGKRGAAIIDARGVSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPKDTIFGFPVTVENGEYKIVQGLEIDAFSQERINLTLKELLEER 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BURP8 (Malate dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=mdh PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.072e-22 Identity = 53/111 (47.75%), Postives = 68/111 (61.26%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D+ W FI V +RG AII+AR A DH+RDWV GT G WV+MG+ DGSY +P ++Y VTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 210 INDEEWNRNTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIVYGVAVTCENGEYKRVEGLQIDAFSREKMDNTLNELLEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_PSYWF (Malate dehydrogenase OS=Psychrobacter sp. (strain PRwf-1) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.401e-22 Identity = 53/110 (48.18%), Postives = 67/110 (60.91%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGL-SIDEFSRKKLDLTAEELSEEK 636 D W +I VQ+RG AII+AR A H+R W GT E WVSMGVY G Y + GLIYSFP TC NG+W IV+GL + +FS++K+ T +ELSEE+ Sbjct: 210 DRDWYENSYIPSVQKRGAAIIEARGASSAASAANAAIAHMRTWALGTDENDWVSMGVYSQGEYGIAKGLIYSFPCTCSNGDWKIVEGLDTSSDFSQEKMKATEQELSEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_FRAAA (Malate dehydrogenase OS=Frankia alni (strain ACN14a) GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.401e-22 Identity = 54/111 (48.65%), Postives = 67/111 (60.36%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D W+ EFI V +RG II+ R A DH+ WV GTPEG W S + DGSY VP GLI SFPVT G++ IVQGL +D FSR+K+D + EL+EE+ Sbjct: 210 VGDQKWIAEEFIPRVAKRGAEIIEVRGASSAASAASAAIDHVYTWVNGTPEGDWTSAAIPSDGSYGVPEGLISSFPVTAAGGKFEIVQGLELDAFSREKIDASVRELAEER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_FRASC (Malate dehydrogenase OS=Frankia sp. (strain CcI3) GN=mdh PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.829e-22 Identity = 55/111 (49.55%), Postives = 66/111 (59.46%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D AW+ EFI V +RG II+ R A DHI WV GTP G W S + DGSY VP GLI SFPVT G + IVQGL +D FSR+K+D + EL+EE+ Sbjct: 210 VGDQAWIADEFIPRVAKRGAEIIEVRGASSAASAASAAIDHIFTWVNGTPAGDWTSAAIPSDGSYGVPEGLISSFPVTASGGRFEIVQGLELDAFSREKIDASVRELAEER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_XYLFT (Malate dehydrogenase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=mdh PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.389e-22 Identity = 53/112 (47.32%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D AW FI V +RG AII+AR A DH+RDW+ G+ G W++MGV DGSY +P G+I+ FPVT NGE++IV+ L ID FS+ +D T EL EE+A Sbjct: 211 INDQAWNANSFIPTVSKRGAAIIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMIFGFPVTTTNGEYSIVKDLPIDTFSKTYIDKTLAELEEERA 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_XYLFM (Malate dehydrogenase OS=Xylella fastidiosa (strain M12) GN=mdh PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.389e-22 Identity = 53/112 (47.32%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D AW FI V +RG AII+AR A DH+RDW+ G+ G W++MGV DGSY +P G+I+ FPVT NGE++IV+ L ID FS+ +D T EL EE+A Sbjct: 211 INDQAWNANSFIPTVSKRGAAIIEARGLSSAASAANAAIDHMRDWLLGS-NGKWITMGVPSDGSYGIPEGMIFGFPVTTTNGEYSIVKDLPIDTFSKTYIDKTLAELEEERA 321 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |