CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_RALEH (Malate dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=mdh PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.814e-20 Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D W N F+ V +RG AII+AR A DH+RDWV GT G V+MG+ +G Y +PA ++ +PVT NG++ IV+GL ID +S++K+++T EL EEKA Sbjct: 210 INDPVWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKVVTMGIPSNGEYGIPADTMFGYPVTTANGKYEIVKGLEIDAYSQEKINITLNELEEEKA 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_CUPTR (Malate dehydrogenase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=mdh PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.497e-20 Identity = 48/112 (42.86%), Postives = 71/112 (63.39%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D W N F+ V +RG AII+AR A DH+RDWV G+ G V+MG+ +G Y +PA ++ +PVT NG++ IV+GL ID +S++K+++T +EL EEKA Sbjct: 210 INDPVWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKVVTMGIPSNGEYGIPADTMFGYPVTTANGKYEIVKGLEIDAYSQEKINITLKELEEEKA 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_RALSO (Malate dehydrogenase OS=Ralstonia solanacearum GN=mdh PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.449e-19 Identity = 45/112 (40.18%), Postives = 71/112 (63.39%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D W N F+ V +RG AII+AR A DH+RDWV G+ G V+MG+ +G Y++P +++ FPVT NG++ +V+G +D +SR+K+++T +EL EE+A Sbjct: 212 INDPVWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKIVTMGIPSNGDYEIPQDVMFGFPVTTANGKYEVVKGFEVDAYSREKINITLKELEEERA 322
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_RALPJ (Malate dehydrogenase OS=Ralstonia pickettii (strain 12J) GN=mdh PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.449e-19 Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D W N F+ V +RG AII+AR A DH+RDWV GT G V+MG+ +G Y +P +++ FPVT NG++ IV+GL IDE+S+ K+ +T +EL E+A Sbjct: 212 INDPVWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKIVTMGIPSNGEYGIPKDVMFGFPVTTENGKYKIVEGLEIDEYSQGKIKITLDELEGERA 322
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDHB_DICDI (Probable malate dehydrogenase 2, mitochondrial OS=Dictyostelium discoideum GN=mdhB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.893e-19 Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = -2 Query: 313 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRN-GEWTIVQGLSIDEFSRKKLDLTAEELSEE 642 + D W+ FI VQQRG AII AR A DH+RDW +GT G W SM +Y +G Y GL +SFPV N G++ IV+GL +D+FS+++ D T +EL E Sbjct: 230 INDQKWVKDNFIPTVQQRGAAIIAARGLSSAASAASAAIDHMRDWTYGT-NGQWTSMAIYSEGEYGADKGLYFSFPVIVDNKGKYEIVKGLKLDQFSQERFDATRKELLSE 339
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_METPP (Malate dehydrogenase OS=Methylibium petroleiphilum (strain PM1) GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.472e-19 Identity = 48/111 (43.24%), Postives = 66/111 (59.46%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D W F+ V +RG AII+AR A DH+RDW GT G WV+MGV +G Y +P +++ FPVTC NGE+ IV GL+ID FS++ ++ T EL E+ Sbjct: 212 INDQVWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGAWVTMGVPSNGEYGIPKDVMFGFPVTCANGEYKIVDGLAIDAFSQECINKTLAELQGEQ 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_LEPCP (Malate dehydrogenase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.472e-19 Identity = 49/111 (44.14%), Postives = 64/111 (57.66%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DD W F+ V +RG AII AR A DH+RDW GT G WV+MGV G Y +PA ++ +PVTC GE+ IV+GL ID FS++ ++ T EL EK Sbjct: 212 INDDVWNRDVFLPTVGKRGAAIIAARGVSSAASAANAAIDHMRDWALGT-NGAWVTMGVPSKGEYGIPAETMFGYPVTCEGGEYKIVEGLPIDAFSQECINKTLAELEGEK 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MYCVP (Malate dehydrogenase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mdh PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.217e-19 Identity = 48/109 (44.04%), Postives = 62/109 (56.88%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D WL +FI V +RG AII+AR A DHI DWV GTP+G W S+ + G+Y V GL+ SFP G W IV+GL I+ FSR ++D + EL E+ Sbjct: 215 DTRWLTDDFIPTVARRGTAIIEARGASSAASAANGAIDHIDDWVHGTPDGDWTSVALPSPGAYGVDEGLVCSFPCRSVGGRWEIVEGLDINPFSRARIDASVAELRTER 323
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH1_RHOFD (Malate dehydrogenase 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.217e-19 Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D W F+ V +RG AII AR A DH+RDW GT G WV+MG+ DG Y +P ++ FPVTC GE+ +VQ L ID FS++ ++ T +EL +E+A Sbjct: 212 INDQDWNANTFLPTVGKRGAAIIAARGVSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSDGQYGIPKETMFGFPVTCEGGEYKVVQNLPIDAFSQECINKTLKELQDEQA 322
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ACICJ (Malate dehydrogenase OS=Acidiphilium cryptum (strain JF-5) GN=mdh PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.227e-18 Identity = 47/111 (42.34%), Postives = 67/111 (60.36%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D+AW FI V +RG A+I+AR A D +RDWV G+ +G WVSM + DGSY +P G+++ PVT + G T V L+ID F++ +LD+T EL EE+ Sbjct: 210 INDEAWNRDVFIPTVGKRGAAVIEARGASSAASAANAAIDQVRDWVVGS-DGRWVSMAIPSDGSYGIPEGIMFGVPVTTQGGVVTRVPNLAIDAFAQSRLDITLNELKEER 319 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |