CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH2_BURTA (Malate dehydrogenase 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh2 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.227e-18 Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = -2 Query: 313 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 642 + D+ W FI V QRG AII+AR A D +RDW+FG+ +G WVSM V DGSY + GL++ PV C G + V+ + ID F+R+++DL+ EL EE Sbjct: 210 INDENWYRESFIPKVAQRGTAIIEARGASSAASAANAAIDQMRDWIFGS-DGRWVSMSVPSDGSYGIAPGLMFGVPVICDGGRYERVKDIGIDAFARQRIDLSVRELQEE 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ACIAC (Malate dehydrogenase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=mdh PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.602e-18 Identity = 46/111 (41.44%), Postives = 65/111 (58.56%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D W F+ V +RG AII+AR A DH+RDW G+ G WV+MGV G Y +P G+++ FPV NGE+ IV+GL ID FS+++++ T EL E+ Sbjct: 212 INDQVWNADVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGS-NGKWVTMGVPSKGEYGIPEGIVFGFPVITENGEYKIVEGLEIDAFSQERINKTLAELQGEQ 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_RALME (Malate dehydrogenase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=mdh PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.093e-18 Identity = 45/112 (40.18%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D W N F+ V +RG AII+AR A DH+ DWV G+ G V+MG+ +G Y +P +++ +PVT NG++ IV+GL ID +S++K+++T +EL EE+A Sbjct: 210 INDPVWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVHDWVLGS-NGKVVTMGIPSNGEYGIPNDVMFGYPVTTANGKYEIVKGLEIDAYSQEKINITLKELEEERA 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_COREF (Malate dehydrogenase OS=Corynebacterium efficiens GN=mdh PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.793e-17 Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D W EFI V +RG II+ R A DH+RDW+ GT W S + G+Y +P G+I P RNGEW +V+GL I++F R ++D EEL E+ Sbjct: 210 DHDWYVNEFIPRVAKRGAEIIEVRGKSSAASAASSAVDHMRDWIQGTET--WASAAIPSTGAYGIPEGIILGLPTVSRNGEWEVVEGLEINDFQRARIDANVEELQGER 316
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_CORDI (Malate dehydrogenase OS=Corynebacterium diphtheriae GN=mdh PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.558e-16 Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D W GEFI V +RG II+ R A DH+ DW+ GT +G W + + DGSY VP GLI+ FP +G+W IVQ L + +F + + EL EE+ Sbjct: 211 DHDWYTGEFIPRVAKRGAEIIEVRGKSSAASAASSAIDHMHDWINGT-DGQWRTAAIPSDGSYGVPEGLIFGFPTISEDGQWKIVQDLELSDFQKDGIARNVTELEEER 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_CORGL (Malate dehydrogenase OS=Corynebacterium glutamicum GN=mdh PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.364e-16 Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D W EFI V RG II+ R A DH+RDWV GT W S + G+Y +P G+ P RNGEW IV+GL I +F R ++D A+EL E+ Sbjct: 215 DHDWYVEEFIPRVANRGAEIIEVRGKSSAASAASSAIDHMRDWVQGTEA--WSSAAIPSTGAYGIPEGIFVGLPTVSRNGEWEIVEGLEISDFQRARIDANAQELQAER 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_CORGB (Malate dehydrogenase OS=Corynebacterium glutamicum (strain R) GN=mdh PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.364e-16 Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D W EFI V RG II+ R A DH+RDWV GT W S + G+Y +P G+ P RNGEW IV+GL I +F R ++D A+EL E+ Sbjct: 215 DHDWYVEEFIPRVANRGAEIIEVRGKSSAASAASSAIDHMRDWVQGTEA--WSSAAIPSTGAYGIPEGIFVGLPTVSRNGEWEIVEGLEISDFQRARIDANAQELQAER 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_DESPS (Malate dehydrogenase OS=Desulfotalea psychrophila GN=mdh PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.699e-16 Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDG-SYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 ++ W I +QQRG A+IKAR A DH+R+WV G+ G WVSMGVY G SY + +++S PV C +G+W V GL + F R L+ T EL E+ Sbjct: 210 ENNWHGDNLIPIIQQRGAAVIKARGASSAASAASAAIDHMRNWVLGSG-GKWVSMGVYSRGNSYGLDEDIMFSLPVICEDGDWREVAGLELSSFQRAMLEATEAELQAER 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_PARUW (Malate dehydrogenase OS=Protochlamydia amoebophila (strain UWE25) GN=mdh PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.270e-15 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGS-YKVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D WL +FI VQ+RG AII+AR D +RD + TP G W S + DG+ Y + GLI+SFP +NGE +IV GL D F +K+ LT +EL EE+ Sbjct: 209 IPDRQWLEKDFIESVQKRGAAIIQARGKSSAASAASALLDAMRDRILPTPTGQWFSTALLSDGNPYGIEEGLIFSFPCRVKKNGELSIVSGLKWDAFLEEKIKLTEQELKEER 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH2_RHOFD (Malate dehydrogenase 2 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh2 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.166e-15 Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = -2 Query: 313 AWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 630 AW + + V +RG AI+ AR A D +RDW GT G W +MGV DG+Y VPAGL++ FPV ++ IV GL++D F+R +D+ EL+ E Sbjct: 217 AWHHDTLVRTVDKRGEAILAARGLYAEASAASAAIDQMRDWWLGT-RGEWTTMGVVSDGAYGVPAGLVFGFPVITDCRDYRIVPGLAVDAFARGMIDVNVRELTAE 321 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |