CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_LEPIN (Malate dehydrogenase OS=Leptospira interrogans GN=mdh PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.394e-14 Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D WL G+FI VQQRG IIKAR D +R + T G S V DGSY GLI+ FP+ + I+QG+S+++F+++K +T EEL E+ Sbjct: 209 ISDHEWLKGDFIKNVQQRGAEIIKARGASSAASAANGVVDTVRGIITPTAPGDCFSAAVVSDGSYGAEKGLIFGFPLKSDGKKVEIIQGISLNDFAKEKFKITHEELVSER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_LEPIC (Malate dehydrogenase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=mdh PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.394e-14 Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D WL G+FI VQQRG IIKAR D +R + T G S V DGSY GLI+ FP+ + I+QG+S+++F+++K +T EEL E+ Sbjct: 209 ISDHEWLKGDFIKNVQQRGAEIIKARGASSAASAANGVVDTVRGIITPTAPGDCFSAAVVSDGSYGAEKGLIFGFPLKSDGKKVEIIQGISLNDFAKEKFKITHEELVSER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH1_BURVG (Malate dehydrogenase 1 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.394e-14 Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = -2 Query: 313 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 642 V D+ W FI V +RG AII+AR A D +RDW+ G+ G WVSM + G Y +P GL++ P C G + +V L ID +R ++D + EL +E Sbjct: 210 VGDERWYLDTFIPEVARRGTAIIEARGASSAASAANAAIDQMRDWIRGSG-GRWVSMSIVSGGEYGIPRGLMFGMPTICSEGRYRVVPDLEIDALARARIDASVAELVDE 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_LEPBP (Malate dehydrogenase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=mdh PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.084e-14 Identity = 41/111 (36.94%), Postives = 58/111 (52.25%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D WL G+FI+ VQ+RG AII AR D + + V T G W S + +G Y V GLI+ +P+ + IV GL I+ F ++K D+T EL EE+ Sbjct: 209 ISDHDWLKGDFISTVQKRGAAIIAARGASSAASAANAVVDTVHNIVTPTKPGDWFSAACHSNGEYGVDKGLIFGYPLKSDGKKVEIVTGLEINAFGKEKFDITHNELKEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_LEPBA (Malate dehydrogenase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=mdh PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.084e-14 Identity = 41/111 (36.94%), Postives = 58/111 (52.25%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D WL G+FI+ VQ+RG AII AR D + + V T G W S + +G Y V GLI+ +P+ + IV GL I+ F ++K D+T EL EE+ Sbjct: 209 ISDHDWLKGDFISTVQKRGAAIIAARGASSAASAANAVVDTVHNIVTPTKPGDWFSAACHSNGEYGVDKGLIFGYPLKSDGKKVEIVTGLEINAFGKEKFDITHNELKEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MAGSM (Malate dehydrogenase OS=Magnetococcus sp. (strain MC-1) GN=mdh PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.967e-14 Identity = 42/112 (37.50%), Postives = 59/112 (52.68%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCR-NGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D AWL F+ VQ RG A+IKAR A DH+R + TP G V +G+Y V AGLI P+T +G+W+IV+G+ + F + K D +EL E+ Sbjct: 207 IADAAWLENAFMPTVQNRGAAVIKARGASSAASAANAALDHVRSLITPTPAGDTFCAAVMANGAYGVDAGLIAGMPLTSTGHGDWSIVEGVPMSPFIKGKFDAVLDELRRER 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_RUBXD (Malate dehydrogenase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=mdh PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.006e-12 Identity = 43/107 (40.19%), Postives = 57/107 (53.27%), Query Frame = -2 Query: 310 WLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTC-RNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 627 W E+I V +RG II+AR A DH+RDW+ G SM V G Y V GL+ SFPV GE+ I +GL + +F+R KL++T EL EE+ Sbjct: 211 WYENEYIPRVGKRGAEIIEARGASSAASAANAAIDHVRDWMLGADS--LHSMAVASSGQYGVEEGLVSSFPVRLPGGGEYEIPEGLEVGDFARSKLEITIGELKEER 315
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_LEPBL (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=mdh PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.006e-12 Identity = 41/111 (36.94%), Postives = 56/111 (50.45%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D WL G+FI VQQRG IIKAR D +R + T G S + DGSY GLI+ FP+ + IVQGL ++F+++K T +EL E+ Sbjct: 209 ISDHEWLKGDFIKNVQQRGAEIIKARGASSAASAANGVVDTVRAIITPTASGDAFSAAIASDGSYGTEKGLIFGFPLKSDGKKVGIVQGLPFNDFAKEKFKTTHDELISER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_LEPBJ (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=mdh PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.006e-12 Identity = 41/111 (36.94%), Postives = 56/111 (50.45%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D WL G+FI VQQRG IIKAR D +R + T G S + DGSY GLI+ FP+ + IVQGL ++F+++K T +EL E+ Sbjct: 209 ISDHEWLKGDFIKNVQQRGAEIIKARGASSAASAANGVVDTVRAIITPTASGDAFSAAIASDGSYGTEKGLIFGFPLKSDGKKVGIVQGLPFNDFAKEKFKTTHDELISER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_LEGPH (Malate dehydrogenase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=mdh PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12 Identity = 39/111 (35.14%), Postives = 55/111 (49.55%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D+ WL F++ VQQRG A+IKAR + V TP G SM G Y V GLI+SFP +GE +V+ L ++F R++ + T EL E+ Sbjct: 210 INDETWLKETFVSTVQQRGAAVIKARGSSSAASAANAIITGVNHLVTDTPAGESFSMCRRSKGEYGVDEGLIFSFPCRREHGELKVVENLEFNDFGRERFNTTLNELRSER 320 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |