CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.018e-29 Identity = 62/106 (58.49%), Postives = 70/106 (66.04%), Query Frame = -2 Query: 310 WLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 627 W +FI VQQRG AIIKAR A H+RDW GTPE WVSMGVY DGSY + GLIYSFP C+NG+W IVQGL+IDEFSR K+ T EL EE+ Sbjct: 213 WYENDFIPTVQQRGAAIIKARGASSAASAANAAIFHMRDWALGTPENDWVSMGVYSDGSYGIEEGLIYSFPCVCKNGDWEIVQGLTIDEFSRAKMTATENELKEER 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_CELJU (Malate dehydrogenase OS=Cellvibrio japonicus (strain Ueda107) GN=mdh PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.495e-29 Identity = 61/109 (55.96%), Postives = 71/109 (65.14%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D AW ++I VQQRG AII AR A +HIRDW GTP WVSMGVY DGSY + GLIYSFP C+NG+W IVQGL I+EFSR K+ T +EL EE+ Sbjct: 210 DQAWYESDYIPTVQQRGAAIIAARGASSAASAANAAINHIRDWALGTPANDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLDINEFSRAKMTATEKELQEER 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.308e-28 Identity = 61/109 (55.96%), Postives = 73/109 (66.97%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D W E+I V +RG AII+AR A DH+RDW GTPEG WVSM V DGSY +P GLIY FPV CRNG++ IVQGL I +FSR+K+D TA+EL EE+ Sbjct: 216 DREWYEKEYIPTVAKRGAAIIEARGASSAASAASAAIDHMRDWALGTPEGEWVSMAVPSDGSYGIPEGLIYGFPVRCRNGQYEIVQGLEISDFSRQKMDATAKELEEER 324
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_TERTT (Malate dehydrogenase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mdh PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.708e-28 Identity = 61/109 (55.96%), Postives = 71/109 (65.14%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D W E+I VQQRG AIIKAR A H+RDW G+PEG WVSMGVY DGSY + GLIYSFP C+NG+W IVQGLSIDEFS+ ++ T EL E+ Sbjct: 210 DSTWYAEEYIPTVQQRGAAIIKARGASSAASAANAAIFHMRDWALGSPEGDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLSIDEFSQARMTATETELQGER 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ALHEH (Malate dehydrogenase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mdh PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.107e-27 Identity = 60/106 (56.60%), Postives = 70/106 (66.04%), Query Frame = -2 Query: 310 WLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 627 W +FI VQQRG AIIKAR A DHIRDWV GTPEG W SM V DGSY + G+IYS+P CRNG++ IVQ L IDEFSR+K+ T +EL EE+ Sbjct: 213 WYENDFIPTVQQRGAAIIKARGASSAASAASSAIDHIRDWVLGTPEGEWTSMAVPSDGSYGIEKGIIYSYPCVCRNGDYEIVQDLEIDEFSREKMQATEKELVEER 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MYCPA (Malate dehydrogenase OS=Mycobacterium paratuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.495e-27 Identity = 59/111 (53.15%), Postives = 71/111 (63.96%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D W+ +FI V +RG AII AR D RDW+ GTP G WVSM V DGSY VP GLI SFPVT ++G+WTIVQGL IDEFSR ++D T EL++E+ Sbjct: 210 VGDQNWIENDFIPTVAKRGAAIIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MYCA1 (Malate dehydrogenase OS=Mycobacterium avium (strain 104) GN=mdh PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.495e-27 Identity = 59/111 (53.15%), Postives = 71/111 (63.96%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D W+ +FI V +RG AII AR D RDW+ GTP G WVSM V DGSY VP GLI SFPVT ++G+WTIVQGL IDEFSR ++D T EL++E+ Sbjct: 210 VGDQNWIENDFIPTVAKRGAAIIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.176e-27 Identity = 60/109 (55.05%), Postives = 71/109 (65.14%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D W E+I V +RG AII+AR A DH+RDW GT EG WVSMG+ DGSY VP GLIY FPVT ++G++ IVQGL I EFSR K+D TA EL EE+ Sbjct: 212 DRTWYEQEYIPTVAKRGAAIIEARGASSAASAASAAIDHMRDWALGTSEGEWVSMGIPSDGSYGVPEGLIYGFPVTVKDGKYQIVQGLEISEFSRGKMDATARELEEER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ARTAT (Malate dehydrogenase OS=Arthrobacter aurescens (strain TC1) GN=mdh PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.176e-27 Identity = 58/112 (51.79%), Postives = 71/112 (63.39%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 V D W+ EFI V RG AII+AR D RDW+ GTPEG WVSM V DGSY VP GL+YS+PVT G W IV+GL +++FSR+K+D TA EL +E+A Sbjct: 209 VNDQDWIENEFIPTVAGRGAAIIEARGASSAASAASATIDAARDWLLGTPEGDWVSMAVASDGSYGVPEGLMYSYPVTTSGGNWEIVEGLEVNDFSRRKMDATAAELFDERA 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_NITEU (Malate dehydrogenase OS=Nitrosomonas europaea GN=mdh PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.599e-26 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = -2 Query: 313 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 642 +KD W+ FI VQ RG +I+AR DH+RDW+FGT + W++MG+ DGSYK+P G+IY FPV C+NG IVQGL I FSR +LD+ +EL++E Sbjct: 209 IKDQTWVENSFIPTVQNRGAVVIEARGLSSAASAANAIIDHMRDWIFGTRDDDWITMGILSDGSYKIPKGVIYGFPVVCKNGGRKIVQGLEISPFSRTRLDIAYDELTQE 318 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |