CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_THEFY (Malate dehydrogenase OS=Thermobifida fusca (strain YX) GN=mdh PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.088e-26 Identity = 58/111 (52.25%), Postives = 71/111 (63.96%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D+ WL FI V +RG AII+AR A DH+ DWV GTPEG W S+ + DGSY VP GL+ SFPV RNG W IVQGL I+EFSR+++D + EL EE+ Sbjct: 210 VNDEEWLRDTFIPTVAKRGAAIIEARGASSAASAANAAIDHVYDWVNGTPEGDWTSVALPSDGSYGVPEGLVSSFPVVSRNGSWEIVQGLEINEFSRERIDASVRELEEER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_PSYCK (Malate dehydrogenase OS=Psychrobacter cryohalolentis (strain K5) GN=mdh PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.727e-26 Identity = 58/110 (52.73%), Postives = 72/110 (65.45%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSI-DEFSRKKLDLTAEELSEEK 636 D AW G +I VQQRG AIIKAR A H+R WV GT E WVSMGVY +G Y + GLIYSFPVTC NG+W+IV G+ + +FS++K+ T +ELSEE+ Sbjct: 212 DRAWYEGTYIPEVQQRGAAIIKARGASSAASAANAAIAHVRTWVMGTDENDWVSMGVYSNGEYGIAKGLIYSFPVTCANGDWSIVDGVDVSSDFSKEKMAATEQELSEER 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_NOCFA (Malate dehydrogenase OS=Nocardia farcinica GN=mdh PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.075e-26 Identity = 58/109 (53.21%), Postives = 71/109 (65.14%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D+ WL +FI VQQRG AII+AR A DHI DWV GTP G W SM V DGSY VP GLI SFPVTC +G + IV+GL +D FSR+++D + EL+ E+ Sbjct: 215 DEQWLREDFIPTVQQRGTAIIQARGASSAASAASAAIDHIHDWVLGTPAGEWTSMAVPSDGSYGVPDGLISSFPVTCADGAYRIVEGLEVDAFSRERIDASVAELTAER 323
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MYCTU (Malate dehydrogenase OS=Mycobacterium tuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.934e-26 Identity = 58/112 (51.79%), Postives = 69/112 (61.61%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 V D AW+ EFI V +RG AII AR D RDW+ GTP WVSM V DGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 210 VNDQAWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MYCTA (Malate dehydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.934e-26 Identity = 58/112 (51.79%), Postives = 69/112 (61.61%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 V D AW+ EFI V +RG AII AR D RDW+ GTP WVSM V DGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 210 VNDQAWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MYCLE (Malate dehydrogenase OS=Mycobacterium leprae GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.934e-26 Identity = 58/111 (52.25%), Postives = 71/111 (63.96%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D AW+ FI V +RG AII AR D RDW+ GTPEG WVSM V DGSY VP GLI SFPVT +G+WTIV+GL ID+FSR ++D + EL++E+ Sbjct: 210 VGDQAWIEDYFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPEGNWVSMAVVSDGSYGVPEGLISSFPVTTTDGDWTIVRGLGIDDFSRGRIDKSTAELADER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MYCBT (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.934e-26 Identity = 58/112 (51.79%), Postives = 69/112 (61.61%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 V D AW+ EFI V +RG AII AR D RDW+ GTP WVSM V DGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 210 VNDQAWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MYCBP (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.934e-26 Identity = 58/112 (51.79%), Postives = 69/112 (61.61%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 V D AW+ EFI V +RG AII AR D RDW+ GTP WVSM V DGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 210 VNDQAWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MYCBO (Malate dehydrogenase OS=Mycobacterium bovis GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.934e-26 Identity = 58/112 (51.79%), Postives = 69/112 (61.61%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 V D AW+ EFI V +RG AII AR D RDW+ GTP WVSM V DGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 210 VNDQAWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_SACEN (Malate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=mdh PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 60/109 (55.05%), Postives = 69/109 (63.30%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D AWL FI V +RG AII+AR A DHI WV GTPEG W S V DGSY VP GLI SFPV R+G + IVQGL IDEFSR+++D + ELSEE+ Sbjct: 211 DQAWLADTFIPTVAKRGAAIIEARGASSAASAANAAIDHIHTWVNGTPEGDWTSAAVVSDGSYGVPEGLISSFPVVARDGRYEIVQGLEIDEFSRQRIDASVNELSEER 319 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |