CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BDEBA (Malate dehydrogenase OS=Bdellovibrio bacteriovorus GN=mdh PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25 Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = -2 Query: 310 DAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 633 DAW FI V +RG AII+AR A DHIRDW GT G WV+MG+ DGSY +P G++Y FPVTC+NGE+ IV+GL ID FSR+K++ T +EL+EEK Sbjct: 222 DAWNKDTFIPTVGKRGAAIIEARGLSSAASAASAAVDHIRDWWLGT-NGEWVTMGIPSDGSYDIPEGIMYGFPVTCKNGEYEIVKGLEIDAFSREKMNNTLKELNEEK 328
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_STRCO (Malate dehydrogenase OS=Streptomyces coelicolor GN=mdh PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.308e-25 Identity = 58/111 (52.25%), Postives = 73/111 (65.77%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D+ WL EFI V +RG AII+AR A DH+ WV GT EG W SMG+ DGSY VP G+I SFPVT ++G + IVQGL I+EFSR ++D + +ELSEE+ Sbjct: 210 VNDEKWLADEFIPTVAKRGAAIIEARGASSAASAANAAIDHVYTWVNGTAEGDWTSMGIPSDGSYGVPEGIISSFPVTTKDGSYEIVQGLDINEFSRARIDASVKELSEER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_NITEC (Malate dehydrogenase OS=Nitrosomonas eutropha (strain C91) GN=mdh PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.717e-25 Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = -2 Query: 313 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 642 +KD W+ FI VQ+RG +I+AR DH+R+W FGT +G W +MG+ DGSY++P G+IY FPV C+NG IVQGL I+ FSR +LD EL++E Sbjct: 209 IKDPIWIENYFIPTVQKRGAVVIEARGLSSAASAANAIIDHLRNWFFGTADGDWTTMGILSDGSYEIPEGVIYGFPVICKNGMREIVQGLEINPFSRTRLDAAYNELTQE 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_CHRVO (Malate dehydrogenase OS=Chromobacterium violaceum GN=mdh PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.717e-25 Identity = 57/112 (50.89%), Postives = 71/112 (63.39%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + DD W F+ V +RG AII+AR A DHIRDWV GT G WV+MGV DGSY +P G++Y PV C NGE+ V+GL ID FSR+++DLT EL EE+A Sbjct: 209 INDDVWNRDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-NGKWVTMGVPSDGSYGIPEGVMYGVPVVCENGEYKRVEGLEIDAFSRERMDLTLAELEEERA 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_STRGG (Malate dehydrogenase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=mdh PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.772e-25 Identity = 56/111 (50.45%), Postives = 73/111 (65.77%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D+ WL FI V +RG AII+AR A DH+ WV GT EG W SMG+ DGSY VP G+I SFPVT ++G++ IVQGL I+EFSR ++D + +EL+EE+ Sbjct: 210 VNDEVWLADTFIPTVAKRGAAIIEARGASSAASAANAAIDHVHTWVNGTAEGDWTSMGIPSDGSYGVPEGIISSFPVTTKDGKYEIVQGLDINEFSRTRIDASVKELTEER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.772e-25 Identity = 56/110 (50.91%), Postives = 69/110 (62.73%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDE-FSRKKLDLTAEELSEEK 636 D W G +I VQQRG AIIKAR A H+R WV GT E WVSMGVY +G Y + GLIYSFP TC NG+W+IV G+ + FS++K+ T +ELSEE+ Sbjct: 212 DRTWYEGTYIPEVQQRGAAIIKARGASSAASAANAAIAHMRTWVLGTDENDWVSMGVYSNGEYGIAKGLIYSFPCTCTNGDWSIVDGVDVSSAFSKEKMAATEQELSEER 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_DEIRA (Malate dehydrogenase OS=Deinococcus radiodurans GN=mdh PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.772e-25 Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 D W ++I V +RG AII+AR A DH+ DW GT +G WVSMG+ DGSY +P GLIY FPV ++G++ IVQGL + +FSR K+D TA+EL EE+ Sbjct: 212 DRTWYENDYIPTVAKRGAAIIEARGASSAASAASAAIDHMHDWALGTKDGEWVSMGIPSDGSYGIPEGLIYGFPVRVKDGKYEIVQGLDVSDFSRGKMDATAQELEEER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_THETH (Malate dehydrogenase OS=Thermus thermophilus GN=mdh PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.146e-24 Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = -2 Query: 313 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 636 D W FI V QRG AII+AR A +HIRDW GTPEG WVSM V G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 210 DMEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_THET8 (Malate dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=mdh PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.146e-24 Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = -2 Query: 313 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 636 D W FI V QRG AII+AR A +HIRDW GTPEG WVSM V G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 210 DMEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_THET2 (Malate dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=mdh PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.146e-24 Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = -2 Query: 313 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 636 D W FI V QRG AII+AR A +HIRDW GTPEG WVSM V G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 210 DMEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |