CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_NOCSJ (Malate dehydrogenase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=mdh PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.146e-24 Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D W+ FI V +RG AII+AR D RDW+FG+ + WVSM V DGSY VP GLI SFPVT ++G+W IVQGL ID+FSR K+D + EL++E+ Sbjct: 209 VGDQDWIESTFIPTVAKRGAAIIEARGSSSAASAASATIDAARDWLFGSADADWVSMAVVSDGSYGVPEGLISSFPVTTKDGDWEIVQGLEIDDFSRAKIDASTAELADER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_AZOSB (Malate dehydrogenase OS=Azoarcus sp. (strain BH72) GN=mdh PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.496e-24 Identity = 57/111 (51.35%), Postives = 72/111 (64.86%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D AW F+ V +RG AII+AR A DHIRDWV G+ G WV+MG+ DGSY +P G+IY FPVT NGE+ IVQGL IDEFSR+++ +T EL EE+ Sbjct: 213 INDAAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGS-NGEWVTMGIPSDGSYGIPEGVIYGFPVTTENGEYKIVQGLEIDEFSRERMTVTLNELLEER 322
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_PROAC (Malate dehydrogenase OS=Propionibacterium acnes GN=mdh PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24 Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = -2 Query: 310 DDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 ++AW+ EFI V +RG AII AR + +RDW+ TPEG WVSM + DGSY VP GLI SFPVT NG+ IVQGL ID+FSR K+D +A+EL++E+ Sbjct: 210 NEAWIENEFIPTVAKRGAAIIDARGASSAASAANATVECMRDWMGSTPEGDWVSMAIPSDGSYGVPEGLISSFPVTITNGKVEIVQGLDIDDFSRAKIDASAKELADER 318
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_LARHH (Malate dehydrogenase OS=Laribacter hongkongensis (strain HLHK9) GN=mdh PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24 Identity = 56/111 (50.45%), Postives = 72/111 (64.86%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D+AW F+ V +RG AII+AR A DHIRDWV GT G WV+MG+ DGSY +P G+ Y FPVTC++G++ IVQGL IDEFSR ++ T EL EE+ Sbjct: 212 INDEAWNRDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-NGKWVTMGIPSDGSYGIPEGVTYGFPVTCKDGKYEIVQGLEIDEFSRACMNKTLAELEEER 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ACIBY (Malate dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=mdh PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24 Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D AW F+ V +RG AII+AR A DH+RDW GT G WV+MGV DGSY +P G+++ FPVT NGE+ IVQGL IDEFSR++++ T EL EE+A Sbjct: 211 INDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ACIBT (Malate dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=mdh PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24 Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D AW F+ V +RG AII+AR A DH+RDW GT G WV+MGV DGSY +P G+++ FPVT NGE+ IVQGL IDEFSR++++ T EL EE+A Sbjct: 211 INDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ACIBS (Malate dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=mdh PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24 Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D AW F+ V +RG AII+AR A DH+RDW GT G WV+MGV DGSY +P G+++ FPVT NGE+ IVQGL IDEFSR++++ T EL EE+A Sbjct: 211 INDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ACIBC (Malate dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=mdh PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24 Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D AW F+ V +RG AII+AR A DH+RDW GT G WV+MGV DGSY +P G+++ FPVT NGE+ IVQGL IDEFSR++++ T EL EE+A Sbjct: 211 INDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ACIB5 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=mdh PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24 Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D AW F+ V +RG AII+AR A DH+RDW GT G WV+MGV DGSY +P G+++ FPVT NGE+ IVQGL IDEFSR++++ T EL EE+A Sbjct: 211 INDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ACIB3 (Malate dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=mdh PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24 Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D AW F+ V +RG AII+AR A DH+RDW GT G WV+MGV DGSY +P G+++ FPVT NGE+ IVQGL IDEFSR++++ T EL EE+A Sbjct: 211 INDPAWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |