CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH1_BURTA (Malate dehydrogenase 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh1 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24 Identity = 57/111 (51.35%), Postives = 70/111 (63.06%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DDAW FI V +RG AII+AR A DH+RDWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 210 INDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_STRAW (Malate dehydrogenase OS=Streptomyces avermitilis GN=mdh PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 56/111 (50.45%), Postives = 72/111 (64.86%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D+ WL +FI V +RG AII+AR A DH+ WV GT +G W SMG+ DGSY VP GLI SFPVT ++G + IVQGL I+EFSR ++D + +EL EE+ Sbjct: 210 VNDEKWLAEDFIPTVAKRGAAIIEARGASSAASAANAAIDHVYTWVNGTADGDWTSMGIPSDGSYGVPEGLISSFPVTTKDGRYEIVQGLEINEFSRARIDASVKELEEER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MYCUA (Malate dehydrogenase OS=Mycobacterium ulcerans (strain Agy99) GN=mdh PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 56/111 (50.45%), Postives = 69/111 (62.16%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D AW+ FI V +RG II AR + D R W+ GTP WVSM V DGSY VP GLI SFPVT ++G W+IV+GL IDEFSR ++D TA EL++E+ Sbjct: 210 VNDQAWIEEYFIPTVAKRGATIIDARGASSAASAASASVDAARSWLLGTPADDWVSMAVLSDGSYGVPEGLISSFPVTTKDGNWSIVKGLEIDEFSRGRIDKTAAELADER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_MYCMM (Malate dehydrogenase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=mdh PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 56/111 (50.45%), Postives = 68/111 (61.26%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V D AW+ FI V +RG AII AR D R W+ GTP WVSM V DGSY VP GLI SFPVT ++G W+IV+GL IDEFSR ++D T EL++E+ Sbjct: 210 VNDQAWIEEYFIPTVAKRGAAIIDARGASSAASAASATVDAARSWLLGTPADDWVSMAVLSDGSYGVPEGLISSFPVTTKDGNWSIVKGLEIDEFSRGRIDKTTAELADER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_DECAR (Malate dehydrogenase OS=Dechloromonas aromatica (strain RCB) GN=mdh PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 53/110 (48.18%), Postives = 75/110 (68.18%), Query Frame = -2 Query: 313 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 642 V D AW N F+ V +RG AII+AR A DH+RDWV G+ E WV+MGV DGSY +PAG+++ FP C+ G+++I+QGL IDE+SR+K++ T +EL++E Sbjct: 213 VNDHAWNNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGSDE--WVTMGVPSDGSYGIPAGIVFGFPCECKGGKFSIIQGLEIDEYSREKINFTLKELTDE 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BURM1 (Malate dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=mdh PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 56/111 (50.45%), Postives = 69/111 (62.16%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DD W FI V +RG AII+AR A DH+RDWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 210 INDDEWNRNTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDATLAELLEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BORA1 (Malate dehydrogenase OS=Bordetella avium (strain 197N) GN=mdh PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D+AW FI V +RG AII+AR A DH+RDWV G+ G WV+MG+ DGSY +P G+IY FPVT NGE+T+V+ L +D FSR+++D T +EL EE+ Sbjct: 212 INDEAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVTTANGEYTMVKDLEVDAFSRERMDFTLKELLEER 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BORPD (Malate dehydrogenase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.333e-24 Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DDAW FI V +RG AII+AR A DH+RDWV G+ G WV+MG+ DGSY +P G+IY PVT NGE+ V+GL ID FSR++LD T +EL EE+ Sbjct: 212 INDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGVPVTTENGEYKRVEGLEIDAFSRERLDFTLKELLEER 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_ACIAD (Malate dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.333e-24 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = -2 Query: 307 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 642 + D W F+ V +RG AII+AR A DH+RDW GT G WV+MG+ DGSY +P G+IY PVTC NGE+ V+GL IDEFSR+++D T +EL EE+A Sbjct: 211 INDAEWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGIPSDGSYGIPEGVIYGVPVTCENGEYKRVEGLEIDEFSRERMDKTLQELEEERA 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BURPP (Malate dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=mdh PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.354e-24 Identity = 56/111 (50.45%), Postives = 69/111 (62.16%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DD W FI V +RG AII+AR A DH+RDWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 210 INDDEWNRNTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLNELLEER 319 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |