CF836200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_AKKM8 (Malate dehydrogenase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=mdh PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.354e-24 Identity = 59/112 (52.68%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPV-TCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 +KD WL G+FIT VQQRG AIIKAR A D +R TPEG W S+ V DGSY + GLI SFPV T ++G W IVQGL +D FSR+K+D T EL EE+ Sbjct: 209 IKDTEWLKGDFITTVQQRGAAIIKARGASSAASAASAAVDTVRSLATQTPEGDWYSVAVCSDGSYGIEKGLICSFPVRTTKDGGWEIVQGLPVDAFSREKIDATVNELKEER 320
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BURCJ (Malate dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=mdh PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.686e-24 Identity = 56/111 (50.45%), Postives = 69/111 (62.16%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DD W FI V +RG AII+AR A DH+RDWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 210 INDDVWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BURCH (Malate dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=mdh PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.686e-24 Identity = 56/111 (50.45%), Postives = 69/111 (62.16%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DD W FI V +RG AII+AR A DH+RDWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 210 INDDVWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BURCC (Malate dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=mdh PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.686e-24 Identity = 56/111 (50.45%), Postives = 69/111 (62.16%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DD W FI V +RG AII+AR A DH+RDWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 210 INDDVWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BURCA (Malate dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=mdh PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.686e-24 Identity = 56/111 (50.45%), Postives = 69/111 (62.16%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DD W FI V +RG AII+AR A DH+RDWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 210 INDDVWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH2_BURVG (Malate dehydrogenase 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.686e-24 Identity = 57/111 (51.35%), Postives = 69/111 (62.16%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 V DD W FI V +RG AII+AR A DH+RDWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 210 VNDDVWNRETFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BURXL (Malate dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=mdh PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.426e-24 Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + D+ W FI V +RG AII+AR A DH+RDWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T +EL EE+ Sbjct: 210 INDEEWNRNTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLQELLEER 319
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BORPE (Malate dehydrogenase OS=Bordetella pertussis GN=mdh PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.426e-24 Identity = 54/111 (48.65%), Postives = 71/111 (63.96%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DDAW FI V +RG AII+AR A DH+RDWV G+ G WV+MG+ DGSY +P G+IY FPV NGE+ +++ L ID FSR++LD T +EL EE+ Sbjct: 212 INDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVVTENGEYKMIKDLEIDAFSRERLDFTLKELLEER 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BORPA (Malate dehydrogenase OS=Bordetella parapertussis GN=mdh PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.426e-24 Identity = 54/111 (48.65%), Postives = 71/111 (63.96%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DDAW FI V +RG AII+AR A DH+RDWV G+ G WV+MG+ DGSY +P G+IY FPV NGE+ +++ L ID FSR++LD T +EL EE+ Sbjct: 212 INDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVVTENGEYKMIKDLEIDAFSRERLDFTLKELLEER 321
BLAST of CF836200 vs. ExPASy Swiss-Prot
Match: MDH_BORBR (Malate dehydrogenase OS=Bordetella bronchiseptica GN=mdh PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.426e-24 Identity = 54/111 (48.65%), Postives = 71/111 (63.96%), Query Frame = -2 Query: 310 VKDDAWLNGEFITPVQQRGGAIIKARKXXXXXXXXXXACDHIRDWVFGTPEGPWVSMGVYFDGSYKVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 642 + DDAW FI V +RG AII+AR A DH+RDWV G+ G WV+MG+ DGSY +P G+IY FPV NGE+ +++ L ID FSR++LD T +EL EE+ Sbjct: 212 INDDAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVVTENGEYKMIKDLEIDAFSRERLDFTLKELLEER 321 The following BLAST results are available for this feature:
BLAST of CF836200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836200 ID=CF836200; Name=CF836200; organism=Citrus sinensis; type=EST; length=643bpback to top |