CF838790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838790 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.321e-21 Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 3 Query: 9 FFVCTAKTEWLFGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 170 FF+CTAKTEWL GKHVVFGQVVEGMDVVKAIEKVGSSSGRT K VV+ DCGQLS Sbjct: 119 FFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172
BLAST of CF838790 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 9.662e-21 Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = 3 Query: 9 FFVCTAKTEWLFGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 170 FF+CT KT+WL GKHVVFGQVVEG+DVVKAIEKVGSSSG+ KPVV+ADCGQLS Sbjct: 119 FFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172
BLAST of CF838790 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.671e-20 Identity = 43/54 (79.63%), Postives = 50/54 (92.59%), Query Frame = 3 Query: 9 FFVCTAKTEWLFGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 170 FF+CT KT+WL GKHVVFGQVVEG+DVVKAIEK+GSSSG+ KPVVIADCG++S Sbjct: 120 FFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173
BLAST of CF838790 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.795e-20 Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 3 Query: 9 FFVCTAKTEWLFGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 167 FF+CTAKTEWL GKHVVFGQVVEGMDV+K E VGSSSGR +KPVVIADCGQL Sbjct: 119 FFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171
BLAST of CF838790 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 8.179e-20 Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 3 Query: 9 FFVCTAKTEWLFGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 170 FF+CT KT WL GKHVVFGQVVEGMDVV+AIEKVGS SG+T KPV IADCGQLS Sbjct: 97 FFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSGQTKKPVKIADCGQLS 150
BLAST of CF838790 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.380e-19 Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 3 Query: 9 FFVCTAKTEWLFGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 170 FF+CT KT WL GKHVVFGQVVEG++VV+ IEKVGS SGRT+KPVVIADCGQ+S Sbjct: 120 FFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173
BLAST of CF838790 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 9.043e-19 Identity = 41/54 (75.93%), Postives = 49/54 (90.74%), Query Frame = 3 Query: 9 FFVCTAKTEWLFGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 170 FF+CT KTEWL GKHVVFG+V+EGM+VV+ IEKVGS SG+T++PV IADCGQLS Sbjct: 119 FFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172
BLAST of CF838790 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.631e-18 Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = 3 Query: 9 FFVCTAKTEWLFGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 170 FF+CT KT WL GKHVVFGQVV+G+DVVKAIEKVGS SG+T+K V I DCGQLS Sbjct: 119 FFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172
BLAST of CF838790 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 4.488e-18 Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = 3 Query: 9 FFVCTAKTEWLFGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 167 FF+CT KT WL GKHVVFGQVVEGMDVV+ IEKVGS SGRT+K VV DCGQL Sbjct: 119 FFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171
BLAST of CF838790 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.705e-17 Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 3 Query: 9 FFVCTAKTEWLFGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 170 FF+CT T WL GKHVVFGQVVEGMDVVKAIEKVG+ +G T+K V +ADCGQLS Sbjct: 119 FFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQLS 172 The following BLAST results are available for this feature:
BLAST of CF838790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838790 ID=CF838790; Name=CF838790; organism=Citrus sinensis; type=EST; length=450bpback to top |