CK739523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 189 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 259
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 189 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 259
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 261
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 190 YPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 260
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 24 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAF 248 +VGYPGG+ F+PL + +E + KE+ NGRLAMLA +G QH TG GP +NL+ HL+DP H T+ F Sbjct: 182 EVGYPGGI-FNPLNFAP-----TQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTF 250
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 42/77 (54.55%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP--GHATVFAA-FTP 254 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL HLADP +A +A FTP Sbjct: 189 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTP 263
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 18 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 G D YPGG FDPLG P+ EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL H+ADP Sbjct: 182 GLDKVYPGGA-FDPLGLAD-DPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADP 247
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 18 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 G D YPGG FDPLG P+ EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL H+ADP Sbjct: 182 GLDKVYPGGA-FDPLGLAD-DPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADP 247
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 261
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG FDPLG PE+ EL+ KE+KNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 188 YPGGS-FDPLGLAE-DPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 258 The following BLAST results are available for this feature:
BLAST of CK739523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739523 ID=CK739523; Name=CK739523; organism=Citrus sinensis; type=EST; length=402bpback to top |