CK739523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.331e-44 Identity = 80/85 (94.12%), Postives = 83/85 (97.65%), Query Frame = 3 Query: 3 NNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 257 NNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLADPGHAT+FAAF+PK Sbjct: 186 NNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.331e-44 Identity = 80/85 (94.12%), Postives = 83/85 (97.65%), Query Frame = 3 Query: 3 NNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFTPK 257 NNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL AHLADPGHAT+FAAF+PK Sbjct: 186 NNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.442e-15 Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 24 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAA 245 D YPGG F+PLG+G + +KEL+ KEIKNGRLAMLA++G + Q + TG GP NL+ HLADP + V + Sbjct: 197 DPAYPGGPLFNPLGFGKDE-KSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTS 269
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.099e-14 Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLIAHLADPGHATVFAAFTPK 257 YPGG FDPLG+ S P K +EL+ KEIKNGRLA+LA++G Q Y GTGP++NL HLADP H + PK Sbjct: 168 YPGGA-FDPLGY-SKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNIGDVIIPK 241
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.448e-14 Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAA 245 YPGG +F+PLG+G + +KEL+ KE+KNGRLAMLA++G + Q + TG GP NL+ H+ADP + V + Sbjct: 202 YPGGPFFNPLGFGKDE-KSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTS 271
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.454e-14 Identity = 42/77 (54.55%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 21 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP+DNL+ HLADP + +A T Sbjct: 187 TDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYAT 261
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14 Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQH-IYTGTGPIDNLIAHLADPGHATVFAAFTPK 257 YPGG FDPLG+ S P K +EL+ KEIKNGRLAMLA +G Q Y GTGP++NL HLADP H + P+ Sbjct: 167 YPGGA-FDPLGF-SKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPR 240
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.215e-13 Identity = 45/82 (54.88%), Postives = 49/82 (59.76%), Query Frame = 3 Query: 18 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAA---FTP 254 G D YPG FDPLG P+ EL+ KEIKNGRLAM + G + Q I TG GPI NL HLADPG FAA FTP Sbjct: 175 GLDPLYPGES-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.707e-13 Identity = 42/77 (54.55%), Postives = 49/77 (63.64%), Query Frame = 3 Query: 21 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL HLADP + +A T Sbjct: 194 TDPIYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYAT 268
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.707e-13 Identity = 45/89 (50.56%), Postives = 53/89 (59.55%), Query Frame = 3 Query: 6 NKLTGTDVG---YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP--GHATVFAA-FTP 254 N L G G YPGG +FDPLG P EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HL DP +A VFA F P Sbjct: 179 NGLDGVGEGNDLYPGGQYFDPLGLAD-DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAP 266 The following BLAST results are available for this feature:
BLAST of CK739523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739523 ID=CK739523; Name=CK739523; organism=Citrus sinensis; type=EST; length=402bpback to top |