CK739523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.105e-12 Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP++NL H+ADP + +A T Sbjct: 186 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYAT 256
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.667e-12 Identity = 39/77 (50.65%), Postives = 48/77 (62.34%), Query Frame = 3 Query: 21 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 TD YPGG FDPL PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLA+P + +A T Sbjct: 165 TDPIYPGGS-FDPLALAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYAT 239
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.667e-12 Identity = 39/76 (51.32%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 24 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 D+ YPGG FDPL PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 45 DLLYPGGS-FDPLA-SLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 118
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.137e-11 Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG FDPLG PE +++ KE+KNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 189 YPGGT-FDPLGLAD-DPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 259
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.137e-11 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP++NL HL+DP Sbjct: 192 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDP 252
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.137e-11 Identity = 36/63 (57.14%), Postives = 42/63 (66.67%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 YPGG FDPLG PE EL+ K IKNGRLAM ++ G + Q I TG GP++NL HLADP Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.137e-11 Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG FDPLG PE EL+ KE+K GRLAML++ G + Q I TG GP++NL H+ADP + +A T Sbjct: 189 YPGGS-FDPLGLAD-DPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYAT 259
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.137e-11 Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG FDPLG + E EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 188 YPGGS-FDPLGLADDA-EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 258
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.533e-11 Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG +FDPLG S P K +L+ EIK+ RLAM+ +G Q TG GP++N HL+DP H T+ F+ Sbjct: 214 YPGGKFFDPLGLAS-DPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFS 285
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.533e-11 Identity = 35/63 (55.56%), Postives = 41/63 (65.08%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 YPGG FDPLG PE EL+ KE KNGRLAM ++ G + Q I TG GP++NL HL DP Sbjct: 191 YPGGS-FDPLGLAE-DPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDP 251 The following BLAST results are available for this feature:
BLAST of CK739523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739523 ID=CK739523; Name=CK739523; organism=Citrus sinensis; type=EST; length=402bpback to top |