CK739736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.087e-41 Identity = 88/175 (50.29%), Postives = 118/175 (67.43%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKAD----VEKFASSFDMPGF 513 HNH I A+AVALKQA TP F+ Y+ Q+ NA A+ N L +GYSLV+GGT+NHLVL DLRP GL G + E++ +L +IT NKN GD SA+ PGG+R+G PA+TSRG LE DF ++ F+ V + LE++ + K L+DF L+ + + AD VE+FA +F MPGF Sbjct: 328 HNHAIAAVAVALKQACTPMFREYSLQILKNAQAMANALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRGFLEDDFRKVVGFIDEGVNIGLEVKSKTTK-LQDFKSFLLKDPETSHQLADLRQRVEQFARAFPMPGF 501
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.532e-40 Identity = 86/185 (46.49%), Postives = 124/185 (67.03%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE-YGKLLKDFNKGLVNN----KDIEALKADVEKFASSFDMPGFKMSEMKYKD 540 HNH I LAVALKQA+TP ++AY +QV +N+ L KGY LV+GGT+NHLVL +++ G+ G++VEK+ + +I NKN V GD SA+ PGG+R+GTPA+TSRG LE+DF ++ +F AV + ++++ E G LKDF L ++ +I L+ DVE++A F GF+ MKYK+ Sbjct: 334 HNHTITGLAVALKQATTPEYRAYQEQVLSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVATLESSAPIKSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 518
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.001e-40 Identity = 88/184 (47.83%), Postives = 121/184 (65.76%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE-YGKLLKDFNKGLVNN---KDIEALKADVEKFASSFDMPGFKMSEMKYKD 540 HNH I LAVALKQA+T +KAY +QV +N+ L GY LV+GGTENHLVL +L+ G+ G+KVEK+ + +I NKN V GD SA+ PGG+R+GTPA+TSRG +E+DF ++ F AV L ++I+ E G LKDF + ++ +I L+ DVE++A F GF+ MKYK+ Sbjct: 334 HNHTITGLAVALKQATTAEYKAYQEQVMSNSAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSKVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGEAKGTKLKDFVTAMESSAIQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 3.413e-40 Identity = 82/174 (47.13%), Postives = 110/174 (63.22%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNN----KDIEALKADVEKFASSFDMPG 510 HNH I +AVALKQ + F Y +Q+ NA L L GYSL TGGT+NHL+L DLRP+G+ G + E + DL +I NKN GD SAL PGG+R+GTPA+TSRG E+DFE++G+F+H V + + E GK LKDF N +++ L VE+F+ F++PG Sbjct: 334 HNHTIAGIAVALKQCLSEDFVQYGEQILKNAKTLAERLKKHGYSLATGGTDNHLLLVDLRPIGVEGARAEHILDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKAFTATNEQFKQEVAELAKRVEEFSGKFEIPG 507
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 4.457e-40 Identity = 82/174 (47.13%), Postives = 111/174 (63.79%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNN----KDIEALKADVEKFASSFDMPG 510 HNH I +AVAL+Q + F Y +QV NA L + GY+L TGGT+NHL+L DLRP+G+ G + E + DL +I NKN GD SAL PGG+R+GTPA+TSRG E+DFE++G+F+H V + + E GK LKDF N KD+ L VE+F++ F++PG Sbjct: 330 HNHTIAGIAVALRQCLSEDFVQYGEQVLKNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKSFTETNEPFKKDVADLAKRVEEFSTKFEIPG 503
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 162.925 bits (411), Expect = 9.930e-40 Identity = 85/175 (48.57%), Postives = 118/175 (67.43%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKD----IEALKADVEKFASSFDMPGF 513 HNH I A+AVALKQA TP F+ Y+ QV NA A+ + L +GYSLV+GGT+NHLVL DLRP GL G + E++ +L +IT NKN GD SA+ PGG+R+G PA+TSR E DF ++ +F+ V + LE++ + K L+DF L+ + + + L+ VE+FA +F MPGF Sbjct: 328 HNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKTAK-LQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGF 501
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.297e-39 Identity = 85/175 (48.57%), Postives = 118/175 (67.43%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKAD----VEKFASSFDMPGF 513 HNH I A+AVALKQA TP F+ Y+ QV NA A+ + L +GYSLV+GGT+NHLVL DLRP GL G + E++ +L +IT NKN GD SA+ PGG+R+G PA+TSR E DF ++ +F+ V + LE++++ K L+DF L+ + + AD V++FA +F MPGF Sbjct: 328 HNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKTAK-LQDFKSFLLKDPETSQHLADLRRRVQQFARAFPMPGF 501
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.212e-39 Identity = 86/184 (46.74%), Postives = 119/184 (64.67%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE-YGKLLKDFNKGLVNN---KDIEALKADVEKFASSFDMPGFKMSEMKYKD 540 HNH I LAVALKQA+T +KAY +QV +N L GY LV+GGTENHLVL +L+ G+ G++VEK+ + +I NKN V GD SA+ PGG+R+GTPA+TSRG +E+DF ++ AV L ++I+ E G LKDF + ++ +I L+ DVE++A F GF+ MKYK+ Sbjct: 334 HNHTITGLAVALKQATTAEYKAYQEQVMSNCAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYLFDLAVKLAVKIKGEAQGTKLKDFVAAMQSSAFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC_NEUCR (Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa GN=for PE=3 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 4.172e-38 Identity = 91/175 (52.00%), Postives = 116/175 (66.29%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ----KEYGKLLKDFNKGLVNN--KDIEALKADVEKFASSFDMP 507 HNH I ALAVALKQA++P FK Y ++V ANA AL L GY LV+ GT++H+VL DLRP+G+ G +VE L + NIT NKNAV GD SAL PGG+RIGTPAMTSRG E DFE++ F+ AV L EIQ KE K KDF + + I LK ++ ++++F +P Sbjct: 297 HNHTITALAVALKQAASPEFKEYQQKVVANAKALEKKLKELGYKLVSDGTDSHMVLVDLRPIGVDGARVEFLLEQINITCNKNAVPGDKSALTPGGLRIGTPAMTSRGFGEADFEKVAVFVDEAVKLCKEIQASLPKEANK-QKDFKAKIATSDIPRINELKQEIAAWSNTFPLP 470
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYM_NEUCR (Putative serine hydroxymethyltransferase, mitochondrial OS=Neurospora crassa GN=NCU05805 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 9.294e-38 Identity = 86/190 (45.26%), Postives = 118/190 (62.11%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL------TGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQK------------EYGKLLKDFNKGLVNNK---DIEALKADVEKFASSFDMP 507 HNH I ALAVALKQA TP F+AY QV ANA AL L G GY++V+GGT+NHLVL DL+P G+ G++VE++ +L + NKN V GD SAL PGG+RIGTPAMT+RG E+DF ++ + + RAVT+ + I K + +K F L N + +I L+++VE + ++ P Sbjct: 333 HNHTIAALAVALKQAQTPEFRAYQSQVLANATALAARLGEPKDKNGLGYTIVSGGTDNHLVLIDLKPQGIDGSRVERVLELVGVAANKNTVPGDKSALTPGGLRIGTPAMTTRGFTEEDFARVADIIDRAVTIAVRINKAAKEDAVKKGNEKAANRVKTFMDYLGNGETDPEIVQLRSEVESWVGTYPCP 522 The following BLAST results are available for this feature:
BLAST of CK739736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739736 ID=CK739736; Name=CK739736; organism=Citrus sinensis; type=EST; length=573bpback to top |