CK739736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.659e-52 Identity = 91/170 (53.53%), Postives = 133/170 (78.24%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 510 H + I +AVALK+AS+P F+ Y KQV+ N+ +G L +GYSLVT GT+NHLVLWDLRP G+TG+K+EK CD +ITVNKNAV+GD++A+APGGVR+G PA+TSRGL E+DF ++ +FL R V ++L+IQ + GK + DF + + +N+D++ ++ +V++F++ F MPG Sbjct: 310 HENTIAGIAVALKEASSPDFQEYTKQVRRNSQTMGEELKKRGYSLVTEGTDNHLVLWDLRPQGITGSKIEKACDEAHITVNKNAVYGDTNAIAPGGVRLGAPALTSRGLKEQDFVKVVDFLDRVVKISLDIQSKVGKKMPDFQRAIADNQDLKQIRQEVKEFSTKFGMPG 479
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 4.751e-50 Identity = 97/170 (57.06%), Postives = 126/170 (74.12%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 510 H + I +AVALK+A + FK YA QVK NA A+GN L KGY LVT GT+NHL+LWDLRP LTGNK EK D+ NITVNKNAV GD++A++PGG+RIG+ A+TSRGL E DFE+I +FL R V+++LEIQ GK L DF + +K++ L+ +VE+F+S F +PG Sbjct: 287 HENVIAGVAVALKEADSQEFKEYALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIANITVNKNAVHGDTNAISPGGIRIGSSALTSRGLKEADFEKIADFLDRIVSISLEIQGRVGKKLVDFVVEINKSKELLDLRKEVEEFSSKFTLPG 456
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3) HSP 1 Score: 177.178 bits (448), Expect = 5.088e-44 Identity = 90/176 (51.14%), Postives = 121/176 (68.75%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYG--KLLKDFNKGLV----NNKDIEALKADVEKFASSFDMPG 510 HNH I +AVALKQA TP F+AY +QV AN AL L G GY +VTGG++NHL+L DLR G G + EK+ + C+I NKN GD SAL P G+R+GTPA+TSRGLLE+DF+++ F+HR + LTL+IQ G LK+F + L +++ + AL+A+VE FA+ F +PG Sbjct: 305 HNHAIAGVAVALKQAMTPEFRAYQRQVVANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQDAVGVKATLKEFMEKLAGAEEHHRAVAALRAEVESFATLFPLPG 480
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC_HUMAN (Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 8.679e-44 Identity = 91/175 (52.00%), Postives = 118/175 (67.43%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYG--KLLKDFNKGLVNNK---DIEALKADVEKFASSFDMPG 510 HNH I +AVALKQA T FK Y QV AN AL LT GY +VTGG++NHL+L DLR G G + EK+ + C+I NKN GD SAL P G+R+GTPA+TSRGLLEKDF+++ F+HR + LTL+IQ + G LK+F + L +K ++AL+ +VE FAS F +PG Sbjct: 305 HNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPG 479
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC_SHEEP (Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1 PE=1 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 1.134e-43 Identity = 90/176 (51.14%), Postives = 119/176 (67.61%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYG--KLLKDFNKGLV----NNKDIEALKADVEKFASSFDMPG 510 HNH I +AVALKQA TP F+AY +QV AN AL L G GY +VTGG++NHL+L DLR G G + EK+ + C+I NKN GD SAL P G+R+GTPA+TSRGLLE+DF ++ F+HR + LTL+IQ G LK+F + L + + + AL+A+VE FA+ F +PG Sbjct: 305 HNHAIAGVAVALKQAMTPEFRAYQRQVVANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFRKVAHFIHRGIELTLQIQDAVGVKATLKEFMEKLAGAEEHQRAVTALRAEVESFATLFPLPG 480
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC_PONAB (Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.934e-43 Identity = 91/175 (52.00%), Postives = 117/175 (66.86%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYG--KLLKDFNKGLVNNK---DIEALKADVEKFASSFDMPG 510 HNH I +AVALKQA T FK Y QV AN AL LT GY +VTGG++NHL+L DLR G G + EK+ + C+I NKN GD SAL P G+R+GTPA+TSRGLLEKDF+++ F+HR + LTL+IQ + G LK+F + L +K ++AL+ VE FAS F +PG Sbjct: 305 HNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKYQGAVQALREKVESFASLFPLPG 479
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 5.626e-43 Identity = 91/183 (49.73%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE-YGKLLKDFNKGLVNN----KDIEALKADVEKFASSFDMPGFKMSEMKY 534 HNH I LAVALKQA+TP ++AY +QV +N+ L+ KGY LV+GGTENHLVL +L+ G+ G++VEK+ +L +I NKN V GD SA+ PGG+R+GTPA+TSRG +E+DF ++ E+ AV+L L+++ E G LKDF + L + +I LK DVE+FA F GF+ + MKY Sbjct: 334 HNHTITGLAVALKQATTPEYRAYQEQVLSNSSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMKY 516
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC_RABIT (Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus GN=SHMT1 PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 5.626e-43 Identity = 88/176 (50.00%), Postives = 118/176 (67.05%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYG--KLLKDFNKGLV----NNKDIEALKADVEKFASSFDMPG 510 HNH I +AVALKQA TP FK Y +QV AN AL L GY +VTGG++NHL+L DLR G G + EK+ + C+I NKN GD SAL P G+R+GTPA+TSRGLLEKDF+++ F+HR + LT++IQ + G LK+F + L + + + AL+ +VE FA+ F +PG Sbjct: 305 HNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPG 480
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC_MOUSE (Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1 PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 9.596e-43 Identity = 88/176 (50.00%), Postives = 118/176 (67.05%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYG--KLLKDFNKGLVNNKDIEA----LKADVEKFASSFDMPG 510 HNH I +AVALKQA T FK Y QV AN AL + LT GY +VTGG++NHL+L DLR G G + EK+ + C+I NKN GD SAL P G+R+GTPA+TSRGLLE+DF+++ F+HR + LTL+IQ LK+F + L ++ I++ L+ +VE FAS+F +PG Sbjct: 299 HNHAIAGVAVALKQAMTTEFKIYQLQVLANCRALSDALTELGYKIVTGGSDNHLILMDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQSHMATKATLKEFKEKLAGDEKIQSAVATLREEVENFASNFSLPG 474
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.637e-42 Identity = 87/185 (47.03%), Postives = 127/185 (68.65%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE-YGKLLKDFNKGLVNNKDIEA----LKADVEKFASSFDMPGFKMSEMKYKD 540 HNH I LAVALKQA+T +KAY +QV +N+ L +GY LV+GGT+NHLVL +L+P G+ G++VEK+ + +I NKN V GD SA+ PGG+R+GTPA+TSRG +E+DF ++ E+ +AVT+ L+++ E G LKDF + ++ I++ L+ +VE+FA F GF+ MKYK+ Sbjct: 333 HNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517 The following BLAST results are available for this feature:
BLAST of CK739736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739736 ID=CK739736; Name=CK739736; organism=Citrus sinensis; type=EST; length=573bpback to top |