CK739736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYM_YEAST (Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=SHM1 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 5.835e-32 Identity = 73/177 (41.24%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL-----TLE--IQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 510 HNH IGA+AVALKQA +P FK Y +++ N+ LT GY LV+GGT+NHL++ DL + G +VE + NI NKN + GD SAL P G+RIGTPAMT+RG ++F Q+ +++ AV L TLE + + L +F K + ++ AL ++ K+ + +PG Sbjct: 312 HNHTIGAMAVALKQAMSPEFKEYQQKIVDNSKWFAQELTKMGYKLVSGGTDNHLIVIDLSGTQVDGARVETILSALNIAANKNTIPGDKSALFPSGLRIGTPAMTTRGFGREEFSQVAKYIDSAVKLAENLKTLEPTTKLDARSRLNEFKKLCNESSEVAALSGEISKWVGQYPVPG 488
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SYMTH (Serine hydroxymethyltransferase OS=Symbiobacterium thermophilum GN=glyA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.997e-28 Identity = 66/125 (52.80%), Postives = 82/125 (65.60%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 378 H I A AVA KQ S P ++AY QV NA AL L +GY LVTGGT+NHL+L DLRP G+TG E L D +ITVNKNA+ D + G+RIGTPAMT+RG+ E + QI + + RA+T Sbjct: 261 HIIAAKAVAFKQLSDPDYRAYCGQVVKNAKALAQALLERGYRLVTGGTDNHLMLVDLRPKGITGRDAEHLLDRVSITVNKNAIPNDPEKPMVTSGIRIGTPAMTTRGMKEAEMVQIADLIDRAIT 385
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_HELMI (Serine hydroxymethyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glyA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.112e-28 Identity = 65/121 (53.72%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 366 H I A AVA ++A PAF AY KQ+ ANA AL LT +G+ LV+GGT+NHL+L DLR LTG + EK D C ITVNKNA+ F S G+RIGTPA TSRG+ E +Q+ E +H Sbjct: 264 HIIAAKAVAFQEAMAPAFTAYQKQIAANAAALAKGLTDRGFQLVSGGTDNHLMLVDLRNKQLTGKEAEKRLDECRITVNKNAIPFDPQSPFVTSGIRIGTPAATSRGMDEAAMDQVAEAIH 384
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_DICT6 (Serine hydroxymethyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=glyA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.161e-26 Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT------LTLEIQKEYGKLLKDF 426 H I A AVA K+A TP FK Y KQ+ NA A+ L GY LV+GGT+NHL+L DLR G+TG + EK + ITVNKNA+ F G+RIGTPA+T+RG+ E + + +H ++ + +++KE +L K F Sbjct: 261 HVIAAKAVAFKEAMTPEFKEYQKQIILNAKAMAEELMRLGYRLVSGGTDNHLMLVDLRDKGITGKEAEKALEEAGITVNKNAIPFDPQPPTVTSGIRIGTPALTTRGMKEDEMRYVARLIHEVLSNFKDSKVKEKVKKEVEELCKQF 407
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_ANATD (Serine hydroxymethyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glyA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.161e-26 Identity = 62/125 (49.60%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 378 H I A AVALK+A T FK Y Q+ NA AL L +G+ LV+GGT+NHL+L DLR G+TG EK+ D NIT NKNAV F S + G+R+GTPA+T+RG E D ++ + +H A+T Sbjct: 264 HVIAAKAVALKEAMTEEFKNYQVQILKNAKALSTRLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKILDEHNITCNKNAVPFDTQSPMITSGIRLGTPAVTTRGFKEGDMLEVADIIHDALT 388
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_CALS8 (Serine hydroxymethyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glyA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.392e-25 Identity = 60/125 (48.00%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 378 H I A AVALK+A T F+ Y Q+ NA AL L +G+ LV+GGT+NHL+L DLR G+TG EK D NIT NKNA+ F S + G+R+GTPA+T+RG E+D ++ + +H A+T Sbjct: 266 HVIAAKAVALKEAMTEEFRNYQIQILKNAKALSERLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKRLDSLNITCNKNAIPFDTQSPMVTSGIRLGTPAVTTRGFKEEDMIEVADIIHDALT 390
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_DICTD (Serine hydroxymethyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=glyA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.818e-25 Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT------LTLEIQKEYGKLLKDF 426 H I A AVA K+A +P FK Y KQ+ NA A+ L GY LV+GGT+NHL+L DLR G+TG + EK + ITVNKNA+ F G+RIGTPA+T+RG+ E + I +H ++ + +++KE +L K F Sbjct: 261 HVIAAKAVAFKEAMSPEFKEYQKQIVLNAKAMAEELIKLGYRLVSGGTDNHLMLVDLRDKGITGKEAEKALEEAGITVNKNAIPFDPQPPTITSGIRIGTPALTTRGMKEDEMRYIARLIHEVLSNFKDERVKEKVKKEVEELCKQF 407
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_EXIS2 (Serine hydroxymethyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glyA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.375e-25 Identity = 61/120 (50.83%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA +A P FK Y +QV ANA LG LT +G +V+GGT+NHL+L DL+PLG+TG E D ITVNKN + F +S G+RIGT AMTSRG E + +QI E + Sbjct: 266 HVIAAKAVAFAEALAPEFKDYIEQVVANAKVLGEELTARGLRIVSGGTDNHLLLVDLQPLGITGKLAEHALDEAGITVNKNTIPFDPASPFVTSGIRIGTAAMTSRGFKEAEMKQIAELI 385
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_PELTS (Serine hydroxymethyltransferase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=glyA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.101e-25 Identity = 65/139 (46.76%), Postives = 87/139 (62.59%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLK 420 H I A AVA K+A P FK Y +++ +NA AL + L +G+ LV+GGT+NHL+L DLR +TG + ++L D +TVNKNAV F G+RIGTPA+TSRGL E D QI E + A+ E + + GKL K Sbjct: 266 HVIAAKAVAFKEAMEPGFKEYQRKIVSNARALADALLERGFELVSGGTDNHLILVDLRSKKITGREAQELFDAVGVTVNKNAVPFDPQPPNIASGIRIGTPAVTSRGLNEDDMVQIAEIMDYAI----EHRDDRGKLEK 400
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 9.023e-25 Identity = 54/131 (41.22%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 1 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI 393 HNH I +A AL A TP F Y ++V N+ L + L G ++TGGT+NH++L DLR G+ G VE +CD I++N+NA+ G+SS L+P G+R+GT A+T+RG ++ ++G+ + V L E+ Sbjct: 286 HNHTIAGIASALLHAGTPEFAEYTRRVVENSRELCSRLQSLGLDILTGGTDNHMLLVDLRSTGVDGAAVEHMCDALGISLNRNAIVGNSSPLSPSGIRVGTYAVTARGFGPEEMREVGDIIGGVVKLCREM 416 The following BLAST results are available for this feature:
BLAST of CK739736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739736 ID=CK739736; Name=CK739736; organism=Citrus sinensis; type=EST; length=573bpback to top |