CK739736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_BUCAP (Serine hydroxymethyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=glyA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.692e-20 Identity = 53/120 (44.17%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A A+A K+A PAFK Y KQV NA + K Y +V+G T NHL L DL +TG + + CNITVNKN + D S G+RIGTPA+T RG E + QI +++ Sbjct: 267 HVIAAKAIAFKEALEPAFKIYQKQVIKNAQVMVQSFLKKDYQIVSGNTFNHLFLLDLTSKNITGQEADIALGKCNITVNKNTIPNDLRSPFITSGIRIGTPAVTKRGFKENEMLQISDWI 386
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_BACSU (Serine hydroxymethyltransferase OS=Bacillus subtilis GN=glyA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.692e-20 Identity = 57/137 (41.61%), Postives = 77/137 (56.20%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKL 414 H I A AV+ + FK YA+ V +NA L LT +G LV+GGT+NHL+L DLR LGLTG E + D IT NKNA+ + G+R+GT A+TSRG E++G + L L+ ++ GKL Sbjct: 261 HVIAAKAVSFGEVLQDDFKTYAQNVISNAKRLAEALTKEGIQLVSGGTDNHLILVDLRSLGLTGKVAEHVLDEIGITSNKNAIPYDPEKPFVTSGIRLGTAAVTSRGFDGDALEEVGAI----IALALKNHEDEGKL 393
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA1_SULDN (Serine hydroxymethyltransferase 1 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=glyA1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.692e-20 Identity = 63/165 (38.18%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSF 498 H I A AV K + +K YA QVKANA LG L +GY LV+GGT+NHLVL +G + ITVNKN V G++ S G+RIG+PA+TSRG+ E++FE I + +L D N N K E++K ++++ A F Sbjct: 261 HVIAAKAVGFKYNLSAEWKDYAVQVKANAKILGEVLVKRGYDLVSGGTDNHLVLLSFLNRDFSGKDADIALGNAGITVNKNTVPGETRSPFVTSGIRIGSPALTSRGMKEREFEFIA--------------NKIADVLDDIN----NTKLQESVKKELKELAQKF 407
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA1_RHIME (Serine hydroxymethyltransferase 1 OS=Rhizobium meliloti GN=glyA1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.692e-20 Identity = 52/120 (43.33%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVAL +A P+FK YA QV NA L L G +V+GGT+NHL+L DLR TG + E +T NKN + F GVR+G PA T+RG E +F+++GE + Sbjct: 272 HVIAAKAVALGEALQPSFKDYAAQVVKNARTLAETLKANGLDIVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEKPFVTSGVRLGAPAGTTRGFKEAEFKEVGELI 391
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_XYLFT (Serine hydroxymethyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=glyA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.740e-20 Identity = 54/120 (45.00%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA K+A PAFK Y +QV NA A+ L +GY +V+GGTENHL+L D+ ++G E +ITVNKNAV D S G+R+GTPA+T+RG E+D + ++ Sbjct: 267 HVIAAKAVAFKEALEPAFKVYQQQVVKNAKAMAGTLMLRGYKIVSGGTENHLMLVDMIGRDVSGKDAEGALGQVHITVNKNAVPDDPRSPFVTSGLRLGTPAVTTRGYQEQDCVDLAHWI 386
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_XYLF2 (Serine hydroxymethyltransferase OS=Xylella fastidiosa (strain M23) GN=glyA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.740e-20 Identity = 54/120 (45.00%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA K+A PAFK Y +QV NA A+ L +GY +V+GGTENHL+L D+ ++G E +ITVNKNAV D S G+R+GTPA+T+RG E+D + ++ Sbjct: 267 HVIAAKAVAFKEALEPAFKVYQQQVVKNAKAMAGTLMLRGYKIVSGGTENHLMLVDMIGRDVSGKDAEGALGQVHITVNKNAVPDDPRSPFVTSGLRLGTPAVTTRGYQEQDCVDLAHWI 386
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_STAAW (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain MW2) GN=glyA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.740e-20 Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR-PLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKL 414 H I A AVA +A FK Y +QV NA L L +G+ +V+GGT+NHLV D++ +GLTG + E+ D IT NKN + F G+R+GTPA T+RG EK FE++ + ++L L+ K+ KL Sbjct: 261 HVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVA----KIISLALKNSKDEEKL 394
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_STAAT (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=glyA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.740e-20 Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR-PLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKL 414 H I A AVA +A FK Y +QV NA L L +G+ +V+GGT+NHLV D++ +GLTG + E+ D IT NKN + F G+R+GTPA T+RG EK FE++ + ++L L+ K+ KL Sbjct: 261 HVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVA----KIISLALKNSKDEEKL 394
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_STAAS (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=glyA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.740e-20 Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR-PLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKL 414 H I A AVA +A FK Y +QV NA L L +G+ +V+GGT+NHLV D++ +GLTG + E+ D IT NKN + F G+R+GTPA T+RG EK FE++ + ++L L+ K+ KL Sbjct: 261 HVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVA----KIISLALKNSKDEEKL 394
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_STAAR (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=glyA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.740e-20 Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR-PLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKL 414 H I A AVA +A FK Y +QV NA L L +G+ +V+GGT+NHLV D++ +GLTG + E+ D IT NKN + F G+R+GTPA T+RG EK FE++ + ++L L+ K+ KL Sbjct: 261 HVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVA----KIISLALKNSKDEEKL 394 The following BLAST results are available for this feature:
BLAST of CK739736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739736 ID=CK739736; Name=CK739736; organism=Citrus sinensis; type=EST; length=573bpback to top |