CK739736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_RHOCS (Serine hydroxymethyltransferase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=glyA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.740e-20 Identity = 53/120 (44.17%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA +A P FKAYA+ V NA L + L G +V+GGT++H+VL DLRP LTG E + +T NKN V F L GVR+G+PA T+RG +F Q+G+ + Sbjct: 272 HVIAAKAVAFGEALRPEFKAYAQAVVDNARVLADRLVAGGLDIVSGGTDSHIVLVDLRPKRLTGKAAEATLEHAGMTCNKNGVPFDPEKPLVTSGVRLGSPAATTRGFGTAEFAQVGDLI 391
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_PROM0 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9301) GN=glyA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.740e-20 Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA +A P F Y++QV NA L + L +G +V+GGT+NH+VL DLR + +TG + L NIT NKN V F S G+R+GT A+T+RG E F ++GE + Sbjct: 265 HIIAAKAVAFGEALQPDFVNYSQQVIKNAKVLASTLINRGIDIVSGGTDNHIVLLDLRSINMTGKIADLLVSEVNITANKNTVPFDPESPFVTSGLRLGTAALTTRGFNENAFAEVGEII 384
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_TOLAT (Serine hydroxymethyltransferase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=glyA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.141e-19 Identity = 51/120 (42.50%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I AVA K+A P FKAY +QV N+ A+ +GY +V+GGTENHL L D LTG + + L NITVNKN+V D S G+RIG+P++T RG E + +++ ++ Sbjct: 267 HVIAGKAVAFKEAMEPEFKAYQQQVVKNSKAMVEVFLARGYKIVSGGTENHLFLVDFTDRELTGKEADAALGLANITVNKNSVPNDPRSPFVTSGIRIGSPSITRRGFKEAEAKELAGWI 386
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_THERP (Serine hydroxymethyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=glyA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.141e-19 Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRG 324 H I AVAL +A P F+ Y ++V NA L L +G+ LV+GGT+NHL+L DLR GL+G K E++ D ITVNKN + D G+R+GTPAMT+RG Sbjct: 262 HVIAGKAVALGEALRPTFRTYIERVLENARVLAETLQAEGFRLVSGGTDNHLLLVDLRSHGLSGRKAERVLDEVGITVNKNTIPNDPKPPTQASGIRLGTPAMTTRG 368
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_RALPJ (Serine hydroxymethyltransferase OS=Ralstonia pickettii (strain 12J) GN=glyA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.141e-19 Identity = 51/120 (42.50%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I AVA K+A +P FKAY +QV NA A+ L +G +V+G TE+H++L DLR +TG + EK+ +ITVNKNA+ D GVR+G+PAMT+RG E + ++ + Sbjct: 265 HVIAGKAVAFKEALSPEFKAYQEQVVKNAAAMAETLMARGLRIVSGRTESHVMLVDLRAKKITGKEAEKVLGDAHITVNKNAIPNDPEKPFVTSGVRLGSPAMTTRGFKEAEAVKVAHLI 384
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_NEIGO (Serine hydroxymethyltransferase OS=Neisseria gonorrhoeae GN=glyA PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.141e-19 Identity = 52/112 (46.43%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 339 H I A AVA K+A P FK YAKQVK NA + L +G +V+G TE+H+ L DL+P+ +TG E +ITVNKNA+ D G+RIG+ AMT+RG E D Sbjct: 265 HVIAAKAVAFKEALQPEFKQYAKQVKINAAVMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAALGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNETD 376
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_NEIG2 (Serine hydroxymethyltransferase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=glyA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.141e-19 Identity = 52/112 (46.43%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 339 H I A AVA K+A P FK YAKQVK NA + L +G +V+G TE+H+ L DL+P+ +TG E +ITVNKNA+ D G+RIG+ AMT+RG E D Sbjct: 265 HVIAAKAVAFKEALQPEFKQYAKQVKINAAVMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAALGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNETD 376
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_NEIG1 (Serine hydroxymethyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=glyA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.141e-19 Identity = 52/112 (46.43%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 339 H I A AVA K+A P FK YAKQVK NA + L +G +V+G TE+H+ L DL+P+ +TG E +ITVNKNA+ D G+RIG+ AMT+RG E D Sbjct: 265 HVIAAKAVAFKEALQPEFKQYAKQVKINAAVMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAALGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNETD 376
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_HAES1 (Serine hydroxymethyltransferase OS=Haemophilus somnus (strain 129Pt) GN=glyA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.141e-19 Identity = 53/120 (44.17%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AV K+A P FK Y QV NA A+ +GY++V+ GTENHL L DL GLTG + NITVNKNAV D G+R+GTPA+T RG E+D ++ ++ Sbjct: 266 HVIAAKAVCFKEALEPEFKTYQAQVVKNAKAMVEVFKQRGYNVVSNGTENHLFLVDLVSHGLTGKAADAALSRANITVNKNAVPNDPQKPFVTSGIRVGTPAVTRRGFNEEDVAELAGWM 385
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_EDWI9 (Serine hydroxymethyltransferase OS=Edwardsiella ictaluri (strain 93-146) GN=glyA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.141e-19 Identity = 53/120 (44.17%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVALK+A P F Y +QV NA A+ + +GY +V+GGTENHL L DL +TG + + NITVNKN+V D S G+RIGTPA+T RG E + ++ ++ Sbjct: 267 HVIAAKAVALKEAMEPEFTRYQQQVAKNAKAMVDVFLQRGYKVVSGGTENHLFLLDLVDRQITGKEADAALGHANITVNKNSVPNDPQSPFVTSGIRIGTPAITRRGFKEAESRELAGWM 386 The following BLAST results are available for this feature:
BLAST of CK739736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739736 ID=CK739736; Name=CK739736; organism=Citrus sinensis; type=EST; length=573bpback to top |