CK739736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHEPC (Serine hydroxymethyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 54/116 (46.55%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 351 H I AVA K+A P FK Y +QV NA A+ +GY +V+GGT NHL+L DL LTG + + NITVNKN+V D S GVRIGTPA+T RG E + +Q+ Sbjct: 267 HVIAGKAVAFKEALEPEFKVYQQQVVNNAKAMVEVFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAEAKQL 382
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHEON (Serine hydroxymethyltransferase OS=Shewanella oneidensis GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 54/116 (46.55%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 351 H I AVA K+A P FK Y +QV NA A+ +GY +V+GGT NHL+L DL LTG + + NITVNKN+V D S GVRIGTPA+T RG E + +Q+ Sbjct: 267 HVIAGKAVAFKEALEPEFKTYQQQVVNNAKAMVEVFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAEAKQL 382
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHEFN (Serine hydroxymethyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 351 H I AVA K+A P FK Y +QV NA A+ +GY +V+GGTENHL+L DL LTG + + NITVNKN+V D S G+RIG+PA+T RG E + +++ Sbjct: 267 HVIAGKAVAFKEALEPEFKVYQQQVVKNAKAMVEVFLARGYKIVSGGTENHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGIRIGSPAITRRGFKEAEAKEL 382
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHEAM (Serine hydroxymethyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 52/120 (43.33%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I AVA K+A P FK Y +QV NA A+ +GY +V+GGT+NHL+L DL LTG + + NITVNKN+V D S G+RIGTPA+T RG E + ++ ++ Sbjct: 267 HVIAGKAVAFKEALEPEFKVYQQQVVTNAKAMVEVFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGAANITVNKNSVPNDPRSPFITSGIRIGTPAITRRGFKEAEARELTHWI 386
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_PROMP (Serine hydroxymethyltransferase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA +A P F Y+KQV NA L + L +G +V+GGT+NH+VL DLR + +TG + L NIT NKN V F S G+R+GT A+T+RG + F ++GE + Sbjct: 265 HIIAAKAVAFGEALKPNFVNYSKQVINNAKVLSSTLIKRGIDIVSGGTDNHIVLLDLRSINMTGKVADLLVSEVNITANKNTVPFDPESPFVTSGLRLGTAALTTRGFNDDAFVEVGEII 384
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_PHOLL (Serine hydroxymethyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 53/120 (44.17%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I AVALK+A P FKAY QV NA A+ +GY +V+G TENHL L DL +TG + NITVNKN+V D S GVRIGTPA+T RG + + ++ ++ Sbjct: 267 HVIAGKAVALKEAMEPEFKAYQHQVADNAKAMVEVFLARGYKVVSGSTENHLFLLDLVDKNITGKDADAALGRANITVNKNSVPNDPKSPFVTSGVRIGTPAITRRGFKQAEARELAGWM 386
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_NITEU (Serine hydroxymethyltransferase OS=Nitrosomonas europaea GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA K+AS+ AFK Y KQV NA + L +G +V+G T+ H+ L DLR LTG + E + +ITVNKNA+ D G+RIGTPA+T+RG E + E++ + Sbjct: 265 HVIAAKAVAFKEASSQAFKDYQKQVIENARVMARVLQQRGLRIVSGRTDCHMFLVDLRAKNLTGREAESALEAAHITVNKNAIPNDPQKPFVTSGIRIGTPAITTRGFKEPESEELANLV 384
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_LISMO (Serine hydroxymethyltransferase OS=Listeria monocytogenes GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 53/125 (42.40%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG----EFLH 366 H I A AVA +A P F Y +Q+ N+ L L +++TGG++NHL+L DL+PLGLTG EK+ D ITVNKN + F S G+R+G A+T+RG E E++G E LH Sbjct: 261 HVIAAKAVAFGEALQPEFTTYCEQIIRNSKKLAETLQANDVAVLTGGSDNHLLLIDLKPLGLTGKAAEKVLDEVGITVNKNTIPFETESPFVTSGIRVGVAAVTTRGFDEVAIEKVGVLISEVLH 385
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_ERWT9 (Serine hydroxymethyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 51/120 (42.50%), Postives = 69/120 (57.50%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I AVA K+A P FK Y +QV NA A+ +GY++V+GGT NHL L DL LTG + + NITVNKN+V D S G+RIG+PA+T RG E + ++ ++ Sbjct: 267 HVIAGKAVAFKEAMEPEFKTYQQQVAKNAKAMVEVFLARGYNVVSGGTHNHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVRELAGWI 386
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB8 (Serine hydroxymethyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 375 H I A AV K+A P+FK Y + V N L L +G+ +V+GGT+NH+ L DL +TG + E L D ITVNKN V ++ S G+RIGT A+T+RG ++ D +I + A+ Sbjct: 263 HIIAAKAVCFKEALDPSFKTYGENVVENCKELAEQLIARGFKIVSGGTDNHVFLVDLNNKDITGKEAEALLDSVGITVNKNTVPNETRSPFVTSGIRIGTAAITTRGFVKDDMAEIAAVISEAI 386 The following BLAST results are available for this feature:
BLAST of CK739736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739736 ID=CK739736; Name=CK739736; organism=Citrus sinensis; type=EST; length=573bpback to top |