CK739736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_BDEBA (Serine hydroxymethyltransferase OS=Bdellovibrio bacteriovorus GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 57/147 (38.78%), Postives = 80/147 (54.42%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT------LTLEIQKEYGKLLKDF 426 H I AVA +A P FK Y+ +V +NA L L G+ LVTGGT+NHL+L DL +TG E D ITVNKN V + S GVRIGTPA+T+RG+ + +QI +++ + + + + +E +L K F Sbjct: 266 HVIAGKAVAFGEALKPEFKDYSGKVVSNAKVLAEELLSAGFKLVTGGTDNHLILVDLSDREITGKLAENSLDEAGITVNKNTVPNEKRSPFVTSGVRIGTPALTTRGMGPAEMKQIAKWIGQVLNNAEDAGVKNRVHEEVKELCKQF 412
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_BAUCH (Serine hydroxymethyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=glyA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A+ALK+A P FK Y QV NA + N + +++V+GGT+NHL L DL +TG + + NITVNKN + D S+ G+RIGTPA+T RG E D Q+ ++ Sbjct: 267 HVIAGKAIALKEAMEPEFKIYQHQVVKNAKTMVNVFLNRNFNVVSGGTDNHLFLLDLVDKNITGQEADAALSYTNITVNKNIIPNDPQSSFVTSGIRIGTPAITRRGFNETDAYQLANWI 386
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA1_AGRT5 (Serine hydroxymethyltransferase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glyA1 PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 54/120 (45.00%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA +A P FK YA QV NA AL L G +V+GGT+NHL+L DLR TG + E IT NKN + F GVR+GTPA T+RG E +F +IG+ + Sbjct: 270 HVIAAKAVAFGEALQPEFKDYAAQVVKNAKALAETLIEGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYITCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFKEAEFREIGKLI 389
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_YERE8 (Serine hydroxymethyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glyA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.543e-19 Identity = 52/120 (43.33%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I AVALK+A P FK Y +QV NA A+ +GY +V+GGT+NHL L DL +TG + NITVNKN+V D S GVRIG+PA+T RG E++ ++ ++ Sbjct: 267 HVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVAVFLERGYKVVSGGTDNHLFLLDLVDKNITGKDADAALGRANITVNKNSVPNDPKSPFVTSGVRIGSPAITRRGFKEEESRELAGWM 386
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_POLNA (Serine hydroxymethyltransferase OS=Polaromonas naphthalenivorans (strain CJ2) GN=glyA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.543e-19 Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 339 H I A A+A K+A +P FK Y +QV NA + LT +G +V+G TE+H++L DLR G+TG + E + ++T+NKNA+ D + GVRIGTPAMT+RG +++ Sbjct: 264 HVIAAKAIAFKEALSPEFKIYQQQVLKNAQIVAETLTQRGLRIVSGRTESHVMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFGDEE 375
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_PHEZH (Serine hydroxymethyltransferase OS=Phenylobacterium zucineum (strain HLK1) GN=glyA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.543e-19 Identity = 51/120 (42.50%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA +A P FK YA+QV NA AL L G+ +V+ GT++HL+L DL P G++G E + IT NKN++ GD + G+R+GTPA T+RG +F Q+G+++ Sbjct: 275 HVIAAKAVAFGEALKPEFKQYARQVIENARALAESLQSVGFKIVSNGTDSHLMLVDLTPKGVSGADAEIALERAGITTNKNSIPGDPLPPMQTSGLRVGTPAGTTRGFGPGEFRQVGKWI 394
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_DESOH (Serine hydroxymethyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=glyA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.543e-19 Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKD 339 H I A AVA +A T F AY +QV NA AL +L +G LV+GGT+NH++L DLR + +TG E + +T+NKNAV F + GVRIGTP MT+RG+ E + Sbjct: 264 HVIAAKAVAFGEALTDGFVAYQQQVVKNARALAAHLMEQGIELVSGGTDNHMMLADLRNISVTGKAAETALERAGLTLNKNAVPFDTENPTVTSGVRIGTPVMTTRGMKEPE 375
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_CHRVO (Serine hydroxymethyltransferase OS=Chromobacterium violaceum GN=glyA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.543e-19 Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA K+A PAFK Y +QV NA + L +G +V+G TE+H+ L DLR GLTG + + L +ITVNKNA+ D + G+RIG+PA+T+RG E + ++ + Sbjct: 264 HVIAAKAVAFKEALQPAFKEYQQQVLKNAAIMAKTLAERGLRIVSGRTESHVFLVDLRAKGLTGKQADALLGRAHITVNKNAIPNDPETPFVTSGIRIGSPAITTRGFKEAEAIEVANMV 383
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_AGRRK (Serine hydroxymethyltransferase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glyA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.543e-19 Identity = 52/120 (43.33%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVAL +A P F+ YA Q+ NA AL L G +V+GGT+NHL+L DLR TG + E +T NKN + F GVR+GTPA T+RG E +F +IG + Sbjct: 272 HVIAAKAVALGEALQPEFQDYAAQIVKNAKALSETLISGGVDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFKEAEFREIGNLI 391
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_THIDA (Serine hydroxymethyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glyA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.321e-19 Identity = 51/120 (42.50%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A A K+A+T FK Y +QV NA+ + L +G +++G TE+H+ L DLR LTG + E L +ITVNKNA+ D G+RIGTPAMT+RG E + EQ+ + Sbjct: 264 HVIAGKATAFKEAATKDFKRYQEQVIDNALVMCKVLVERGLRIISGRTESHVFLVDLRAKNLTGKEAEALLGRAHITVNKNAIPNDPQKPFVTSGIRIGTPAMTTRGFTELEAEQLAHLI 383 The following BLAST results are available for this feature:
BLAST of CK739736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739736 ID=CK739736; Name=CK739736; organism=Citrus sinensis; type=EST; length=573bpback to top |