CK739736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_ACIF2 (Serine hydroxymethyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=glyA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.321e-19 Identity = 54/117 (46.15%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 354 H I A AVA ++A P FK+Y +QV NA L L G+GY V+GGT+NHL L +L +TG + E+ NITVNKNAV F G+RIGTPA T+RG E + ++G Sbjct: 265 HVIAAKAVAFREALQPEFKSYQQQVIHNAQTLSKVLAGRGYGAVSGGTDNHLFLLNLGE-KVTGKEAEEALGQANITVNKNAVPFDIRPPAVTSGIRIGTPAATTRGFGEAEMHRLG 380
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_ACICJ (Serine hydroxymethyltransferase OS=Acidiphilium cryptum (strain JF-5) GN=glyA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.321e-19 Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA +A P F+AY K + NA L L G +VTGGT+ HL+L DLRP +TG E + ++T NKNA+ F + G+R+GTPA T+RG +F +G F+ Sbjct: 276 HVIAAKAVAFGEALRPEFRAYQKALAENAKVLAETLVEGGLDIVTGGTDCHLMLVDLRPKNVTGKAAEASLERAHMTANKNAIPFDPAKPAVTSGIRLGTPAATTRGFGPDEFRMVGRFI 395
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_ACIAC (Serine hydroxymethyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=glyA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.321e-19 Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 339 H I A AVA K+A TP FKAY +QV NA L +G +++G TE+H++L DLR G+TG E +IT+NKN++ D + G+R+GTPA+T+RG E++ Sbjct: 264 HVIAAKAVAFKEALTPEFKAYQQQVAKNAKVFAETLIERGLRIISGRTESHVMLVDLRAKGITGKAAEAALGQAHITINKNSIPNDPEKPMVTSGIRVGTPAITTRGFKEEE 375
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA1_VIBPA (Serine hydroxymethyltransferase 1 OS=Vibrio parahaemolyticus GN=glyA1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.321e-19 Identity = 51/120 (42.50%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I AVA K+A P FKAY +V NA A+ +GY +V+ GTENHL L DL +TG + NITVNKN+V D S G+R+GTPA+T RG E+D + + ++ Sbjct: 266 HVIAGKAVAFKEAMEPEFKAYQARVVKNAKAMVGQFQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSGIRVGTPAITRRGFTEEDAKDLANWM 385
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_STAS1 (Serine hydroxymethyltransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR-PLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA +A FK Y +QV NA L N LT +G+ +V+GGT+NHLV D++ +G+TG E+ D IT NKN + F G+R+GTPA T+RG E FE++ + + Sbjct: 261 HVIAAKAVAFGEALQDDFKVYQQQVIQNAKTLANTLTDEGFRVVSGGTDNHLVAVDVKGSVGITGKVAEETLDAIGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDETAFEEVAKII 381
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHEWM (Serine hydroxymethyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 64/169 (37.87%), Postives = 84/169 (49.70%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 510 H I A AVA K+A P F AY +QV NA A+ +GY +V+GGT+NHL L DL +TG + L NITVNKN+V D S G+RIG+PA+T RG E +AV LT + D + N IE +K V + + F + G Sbjct: 268 HVIAAKAVAFKEALEPEFTAYQEQVVVNAQAMAKTFIERGYDVVSGGTDNHLFLLDLISKDITGKDADAALGLANITVNKNSVPNDPRSPFVTSGLRIGSPAITRRGFKEA----------QAVELT--------NWMCDVLDDITNEGTIERVKNQVLELCAKFPVYG 418
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHESW (Serine hydroxymethyltransferase OS=Shewanella sp. (strain W3-18-1) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 53/116 (45.69%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 351 H I AVA K+A P FK Y +QV NA A+ +GY +V+GGT NHL+L DL LTG + + NITVNKN+V D S GVRIGTPA+T RG E + +++ Sbjct: 267 HVIAGKAVAFKEALEPEFKVYQQQVVNNAKAMVEVFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAESKEL 382
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHESH (Serine hydroxymethyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 52/120 (43.33%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA K+A P F AY +QV NA A+ +GY +V+GGT+NHL L DL +TG + L NITVNKN+V D S G+RIG+PA+T RG E+ ++ ++ Sbjct: 268 HVIAAKAVAFKEALEPEFTAYQEQVVVNAKAMAKTFIERGYDVVSGGTDNHLFLLDLISKDITGKDADAALGLANITVNKNSVPNDPRSPFVTSGLRIGSPAITRRGFKEEQSVELTNWM 387
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHELP (Serine hydroxymethyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 62/169 (36.69%), Postives = 84/169 (49.70%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 510 H I AVA K+A +P FK Y +QV NA A+ N +G+ +V+GGTENHL L DL +TG + NITVNKN+V D S G+RIG+PA+T RG E + +E+ +L D N N IE +K V + + F + G Sbjct: 267 HVIAGKAVAFKEALSPEFKEYQQQVVVNAKAMANTFIERGFDVVSGGTENHLFLLDLIAKDITGKDADAALGRANITVNKNSVPNDPRSPFVTSGLRIGSPAITRRGFKEAE--------------AVELTNWICDVLDDIN----NEATIERVKNQVLELCAKFPVYG 417
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHEDO (Serine hydroxymethyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 53/112 (47.32%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 339 H I AVA K+A P FK Y +QV NA A+ +GY +V+GGT+NHL+L DL LTG + + NITVNKN+V D S GVRIGTPA+T RG E + Sbjct: 267 HVIAGKAVAFKEALEPEFKTYQQQVVKNAKAMVEVFIERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAE 378 The following BLAST results are available for this feature:
BLAST of CK739736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739736 ID=CK739736; Name=CK739736; organism=Citrus sinensis; type=EST; length=573bpback to top |