CK739736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHEB9 (Serine hydroxymethyltransferase OS=Shewanella baltica (strain OS195) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 53/116 (45.69%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 351 H I AVA K+A P FK Y +QV NA A+ +GY +V+GGT NHL+L DL LTG + + NITVNKN+V D S GVRIGTPA+T RG E + +++ Sbjct: 267 HVIAGKAVAFKEALEPEFKVYQQQVVNNAKAMVEVFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAESKEL 382
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHEB8 (Serine hydroxymethyltransferase OS=Shewanella baltica (strain OS185) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 53/116 (45.69%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 351 H I AVA K+A P FK Y +QV NA A+ +GY +V+GGT NHL+L DL LTG + + NITVNKN+V D S GVRIGTPA+T RG E + +++ Sbjct: 267 HVIAGKAVAFKEALEPEFKVYQQQVVNNAKAMVEVFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAESKEL 382
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SHEB2 (Serine hydroxymethyltransferase OS=Shewanella baltica (strain OS223) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 53/116 (45.69%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 351 H I AVA K+A P FK Y +QV NA A+ +GY +V+GGT NHL+L DL LTG + + NITVNKN+V D S GVRIGTPA+T RG E + +++ Sbjct: 267 HVIAGKAVAFKEALEPEFKVYQQQVVNNAKAMVEVFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAESKEL 382
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_PHYMT (Serine hydroxymethyltransferase OS=Phytoplasma mali (strain AT) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL--GLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 378 H I A AVA K+A F Y KQ+ NA L KGY +++ TENHL L D++ TG K+ + + NI VNKN + F + L G+R+GTPAMT+RG E +F ++ +F+ A+T Sbjct: 267 HIIAAKAVAFKEALHSDFIKYQKQILKNACFFAENLQKKGYRIISKSTENHLFLVDVKSKNPNFTGKKISDILNKVNIVVNKNVIPFDKETPLITSGIRLGTPAMTTRGFKENEFAKVSDFIDEAIT 393
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_MYCGA (Serine hydroxymethyltransferase OS=Mycoplasma gallisepticum GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 52/125 (41.60%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDL-RPLGLTGNKVEKLCDLCNITVNKNAVFGDSS-ALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 375 H I A A+A +A P FK Y K V N+ A KGY ++ GT+NHL +L + LTG+ VE NI VNKN + DS+ ++ P G+R+GT AMTSRGL++ DF QI +++ + + Sbjct: 259 HVIAAKAIAFDEALQPKFKTYIKNVIDNSKAFCEAFINKGYQIIANGTDNHLFSINLFKKFNLTGDLVENWLYQANIVVNKNMIPYDSNKSMNPSGIRLGTAAMTSRGLVQSDFVQIADWIDQII 383
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_LISW6 (Serine hydroxymethyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 53/125 (42.40%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG----EFLH 366 H I A AVA +A P F Y +Q+ N+ L L +++TGG++NHL+L DL+PL LTG VEK+ D ITVNKN + F S G+R+G A+T+RG E E++G E LH Sbjct: 261 HVIAAKAVAFGEALQPEFTTYCEQIIRNSKKLAETLQAHDVTVLTGGSDNHLLLIDLKPLSLTGKAVEKVLDEVGITVNKNTIPFETESPFVTSGIRVGVAAVTTRGFDEVAIEKVGVLISEVLH 385
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_JANSC (Serine hydroxymethyltransferase OS=Jannaschia sp. (strain CCS1) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 53/124 (42.74%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 375 H I AVA +A P F+ Y QV ANA AL L G +VTGGT+ HL+L DLR G+ GN EK +IT NKN + F + G+R+G+PA T+RG E +F QI +++ V Sbjct: 281 HVIAGKAVAFGEALRPEFRDYQTQVIANAQALAAQLIKGGLDIVTGGTDTHLMLVDLRAKGVKGNATEKALGRAHITCNKNGIPFDTEKPMVTSGLRLGSPAGTTRGFGEAEFRQIADWIVEVV 404
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_JANMA (Serine hydroxymethyltransferase OS=Janthinobacterium sp. (strain Marseille) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 59/169 (34.91%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 510 H I AVA K+A P FK Y +QV NA AL L +G +V+ TE+H++L DLR +TG E L +IT NKNA+ D G+R+G+PAMT+RG E + ++ G L+ D + + IE +KA+V+K +F + G Sbjct: 264 HVIAGKAVAFKEALAPEFKTYQQQVVKNADALAKALIARGLRIVSNRTESHVMLVDLRAKKITGKDAENLLGSAHITCNKNAIPNDPEKPFVTSGIRLGSPAMTTRGFKEAEATKV------------------GNLIADVLENPNDAATIERVKAEVKKLTDAFPVYG 414
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_EHRCR (Serine hydroxymethyltransferase OS=Ehrlichia chaffeensis (strain Arkansas) GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG-------EFLHRAVTLTLEIQKEYGKLLKDFNKGLV 441 H I A AVA +A P FK YAKQ+ N+ ALG +G LVTGGT++H+V+ DLR +TG + I NKNA+ F G+R G+ A TSRGL E +F +IG + L + ++ L ++++ K +K+ + Sbjct: 268 HVIAAKAVAFAEALKPEFKDYAKQIIKNSKALGEVFKERGLDLVTGGTDSHMVVLDLRSKSVTGKDAVLALEKLGIICNKNAIPFDPEKPFVTSGLRFGSAAETSRGLQESEFREIGSMVCDVIDSLKASDSVRLSVERDIIKRVKELTSNFI 420
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_BACTN (Serine hydroxymethyltransferase OS=Bacteroides thetaiotaomicron GN=glyA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.337e-19 Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL--GLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 378 H I A AVA + P +K YAKQV+ NA L L +G+++V+GGT+NH +L DLR LTG EK +ITVNKN V F SA G+R+GTPA+T+RG E +I E + ++ Sbjct: 273 HVIAAKAVAFGEILQPEYKEYAKQVQKNAAILAQALIDRGFTIVSGGTDNHSMLVDLRSKYPDLTGKVAEKALVSADITVNKNMVPFDSRSAFQTSGIRLGTPAITTRGAKEDLMIEIAEMIETVLS 399 The following BLAST results are available for this feature:
BLAST of CK739736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739736 ID=CK739736; Name=CK739736; organism=Citrus sinensis; type=EST; length=573bpback to top |