CK739736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_GEOLS (Serine hydroxymethyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=glyA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.951e-23 Identity = 62/147 (42.18%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT------LTLEIQKEYGKLLKDF 426 H I A AVA K+A P FK Y +Q+ NA L L KG+ L +GGT+NHL+L + +TG E+ D ITVNKN V F S G+R+GTPA TS GL E + EQ+ F+ AV IQK +L+K F Sbjct: 261 HVIAAKAVAFKEALQPEFKTYQQQIVKNAAKLAECLMAKGFKLTSGGTDNHLMLINFTGTEITGKAAEEALDKAGITVNKNTVPFETRSPFVTSGIRVGTPACTSHGLKETEMEQVAGFIADAVANIGNDEALAAIQKRVNELMKKF 407
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_CLOTH (Serine hydroxymethyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=glyA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.951e-23 Identity = 57/125 (45.60%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 378 H I A AV+ + T FK Y +Q+ NA L N L KG LV+GGT+NHL+L DLR GLTG V+ + D ITVNKN + F S G+RIGTPA+T+RG+ E+D +I + ++ +T Sbjct: 264 HVIAAKAVSFAEVLTDEFKQYQQQIVKNAKTLANALMEKGIDLVSGGTDNHLMLVDLRNKGLTGKYVQHILDEVCITVNKNGIPFDPESPFVTSGIRIGTPAVTARGMKEEDMVEIADLINLTIT 388
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_THET8 (Serine hydroxymethyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glyA PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.466e-23 Identity = 57/124 (45.97%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 375 H I AVA +A P FK Y++ V NA L L +GY +VTGGT+NHL L DLRP GLTG + E+ D ITVNKNA+ F G+RIGTPA+T+RG ++ + E + RA+ Sbjct: 262 HVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRAL 385
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_THET2 (Serine hydroxymethyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glyA PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 6.466e-23 Identity = 57/124 (45.97%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 375 H I AVA +A P FK Y++ V NA L L +GY +VTGGT+NHL L DLRP GLTG + E+ D ITVNKNA+ F G+RIGTPA+T+RG ++ + E + RA+ Sbjct: 262 HVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEALARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRAL 385
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_THEP1 (Serine hydroxymethyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glyA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.466e-23 Identity = 58/148 (39.19%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV--------TLTLEIQKEYGKLLKD 423 H I A AV K+A T FK Y KQV NA + +GY +V+GGT+ HL L DL P +TG EK + C ITVNKN + + S G+RIGTPA+T+RG+ E++ E+I E + + T+ E+++E K +++ Sbjct: 263 HVIAAKAVCFKEAMTEEFKEYQKQVVKNAKKMAEEFQKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEEEMEEIAEMIDLVLSNVTDENGTVKPEVREEVSKRVRE 410
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_THEMA (Serine hydroxymethyltransferase OS=Thermotoga maritima GN=glyA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.466e-23 Identity = 58/148 (39.19%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV--------TLTLEIQKEYGKLLKD 423 H I A AV K+A T FK Y KQV NA + +GY +V+GGT+ HL L DL P +TG EK + C ITVNKN + + S G+RIGTPA+T+RG+ E++ E+I E + + T+ E+++E K +++ Sbjct: 263 HVIAAKAVCFKEAMTEEFKEYQKQVVKNAKKMAEEFQKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEEEMEEIAEMIDLVLSNVIDENGTVKPEVREEVSKKVRE 410
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_PETMO (Serine hydroxymethyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glyA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.466e-23 Identity = 63/154 (40.91%), Postives = 90/154 (58.44%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEAL 465 H I A AVA K+A + FK Y KQV N+ AL N L K +V+GGT+ HL L DL L +TG +EK C+ITVNKN V ++ S G+RIGTPA+T+RG+ E++ ++I + + L+ E G + KD + + KD+ +L Sbjct: 263 HIIAAKAVAFKEAMSGEFKEYQKQVVRNSKALSNELASKNLRIVSGGTDTHLFLVDLSELNITGKALEKALGQCDITVNKNTVPKETLSPFVTSGIRIGTPAVTTRGMKEEEMKEIASMIAKVANNVLD---EEGNIDKDLAQEI--KKDVVSL 411
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.466e-23 Identity = 62/133 (46.62%), Postives = 79/133 (59.40%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE 402 H I A AVAL +A P FK Y +Q+ NA AL L +G+ LV GGT+ HL+L DLR GLTG E L D ++TVNKN V F G+RIGTPA+T+RG+ E QI E ++LTL+ +E Sbjct: 264 HVIAAKAVALGEAQRPEFKTYQEQIVKNARALAQALQERGFELVAGGTDTHLILVDLRNKGLTGAVAEDLLDRVDVTVNKNMVPFDPQPPRVTSGIRIGTPAVTTRGMKEDSMVQIAE----VISLTLDHPEE 392
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_RHOP5 (Serine hydroxymethyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=glyA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 57/117 (48.72%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 354 H I A AVA K+A P FK YAK V NA AL L G G+ +V+GGT+NHL+L DLRP L GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G Sbjct: 277 HVIAAKAVAFKEALQPDFKVYAKNVVENAKALAETLRGHGFDIVSGGTDNHLMLVDLRPKALKGNVSEKALVRAGITCNKNGIPFDPEKPFVTSGIRLGTPAATTRGFGVAEFQQVG 393
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_RHOP2 (Serine hydroxymethyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=glyA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 58/120 (48.33%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I A AVA K+A P FK YAK V NA AL L G+ LV+GGT+NHL+L DLRP GL GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G + Sbjct: 277 HVIAAKAVAFKEALQPDFKVYAKNVVENAKALAETLRAAGFDLVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAAITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGNLI 396 The following BLAST results are available for this feature:
BLAST of CK739736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739736 ID=CK739736; Name=CK739736; organism=Citrus sinensis; type=EST; length=573bpback to top |