CK739736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_PROA2 (Serine hydroxymethyltransferase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=glyA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 59/124 (47.58%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 375 H I A AVA +A P FK YA QV+ANA A+ Y++V+GGT+NHL+L DLR +TG E L ITVNKN V F D S G+RIGTPAMT+RG+ E E I + R + Sbjct: 282 HIIAAKAVAFGEALQPEFKEYAVQVRANAAAMAQKFISLDYNIVSGGTKNHLMLIDLRNKNVTGKVAENLLHEAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMTESHAEAIVSLIDRVI 405
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_METPE (Serine hydroxymethyltransferase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=glyA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 65/167 (38.92%), Postives = 89/167 (53.29%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDM 504 H I AV K+A P+FK Y++QV NA AL L G LV+GGT+NHL+L DL GLTG + E ITVNKN + ++ S G+RIGTPA+TSRG+ E + QIGE++ R + K + + I A+K +V AS + + Sbjct: 262 HTIAGKAVCFKEALQPSFKQYSRQVVKNAQALAETLGEAGLRLVSGGTDNHLILIDLSNRGLTGLEAEVALGKAGITVNKNTIPNENRSPFVTSGLRIGTPAVTSRGMKEDEMHQIGEYIIRVL------------------KDIQDEATISAVKNEVTALASRYSL 410
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_HYPME (Serine hydroxymethyltransferase OS=Hyphomicrobium methylovorum GN=glyA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 57/120 (47.50%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I AVA +A P FK Y KQV NA ALG L G++LV+GGT+ HLVL DLRP LTG K EK NIT NKN + F + G+R+G+PA T+RG +F++IG + Sbjct: 278 HVIAGKAVAFGEALRPDFKVYIKQVMDNARALGEVLVQNGFALVSGGTDTHLVLVDLRPKKLTGTKAEKALGRANITCNKNGIPFDPEKPMVTSGIRLGSPAGTTRGFGVAEFQEIGRLI 397
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_BORRA (Serine hydroxymethyltransferase OS=Borrelia recurrentis (strain A1) GN=glyA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 63/168 (37.50%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMP 507 H I AVA K+A FK Y +V N A+ Y +G +V+GGT+NHL L DL LG+TG EK+ + NIT+NKNA+ F + G+RIG PA+TSRGL D ++ F+ RA+ + ++ +K +V F SSFDMP Sbjct: 269 HVIAGKAVAFKEALNKEFKDYISRVIENTKAMAEYFISEGLRIVSGGTDNHLFLVDLSGLGITGADAEKILESVNITLNKNAIPFDSKNPSVASGIRIGAPAITSRGLNRDDSIKVAHFIIRALKTK-------------------STDELRKIKQEVIGFISSFDMP 417
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_BORDL (Serine hydroxymethyltransferase OS=Borrelia duttonii (strain Ly) GN=glyA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 63/168 (37.50%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMP 507 H I AVA K+A FK Y +V N A+ Y +G +V+GGT+NHL L DL LG+TG EK+ + NIT+NKNA+ F + G+RIG PA+TSRGL D ++ F+ RA+ + ++ +K +V F SSFDMP Sbjct: 269 HVIAGKAVAFKEALNKEFKDYISRVIENTKAMAEYFISEGLRIVSGGTDNHLFLVDLSGLGITGADAEKILESVNITLNKNAIPFDSKNPSVASGIRIGAPAITSRGLNRDDSIKVAHFIIRALKTK-------------------STDELRKIKQEVIGFISSFDMP 417
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_ALKMQ (Serine hydroxymethyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glyA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 57/116 (49.14%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQI 351 H I A AVA K+A P FKAY +QV NA ALG L +G+ LV+ GT+ HL+L DLR +TG E+L D ITVNKN + F S G+RIGTPA+T+RG+ E++ ++I Sbjct: 263 HVIAAKAVAFKEALEPGFKAYQEQVIKNAKALGEELKKQGFDLVSDGTDTHLLLIDLRNKNITGKDAERLFDEVGITVNKNTIPFDPQSPFVTSGIRIGTPAVTTRGMKEEEMKKI 378
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 54/117 (46.15%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 354 H I A AV K+A P+FK YA QV ANA L L +G+ +++GGT+ HL+L D+ G+ G++ EK ITVNKNA+ F + + P GVRIGTPA+T+RG+ E + Q+G Sbjct: 266 HIIAAKAVCFKEAMEPSFKDYANQVVANAKVLAQSLADQGFRIISGGTDTHLMLIDVFAAGMLGSEAEKALGEAGITVNKNAIPFDTNPPMKPSGVRIGTPALTTRGMKEPEMRQVG 382
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA2_RALSO (Serine hydroxymethyltransferase 2 OS=Ralstonia solanacearum GN=glyA2 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 58/120 (48.33%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 363 H I AVA +A P FK Y V ANA ALG L G LVTGGT+NHL+L DLRP GL G +VE+ + IT NKN + F G+R+GTPA T+RG +FEQIG + Sbjct: 270 HVIAGKAVAFGEALKPEFKTYIDSVLANAKALGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGTQVEQALERAGITCNKNGIPFDTEKPTITSGIRLGTPAATTRGFGVAEFEQIGRLI 389
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_SILST (Serine hydroxymethyltransferase OS=Silicibacter sp. (strain TM1040) GN=glyA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.103e-22 Identity = 56/124 (45.16%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 375 H I A A +A P FK+Y KQV+ANAVAL + L G +VTGGT+ H++L DLRP G+TGN V+K +IT NKN + F G+R+GTPA T+RG E++F +I + V Sbjct: 273 HVIAGKAAAFGEALKPEFKSYQKQVRANAVALADELIKGGLDIVTGGTDTHVMLVDLRPKGVTGNIVDKALGRAHITTNKNGIPFDPEKPTVTSGIRLGTPAGTTRGFGEEEFREIARLIVEVV 396
BLAST of CK739736 vs. ExPASy Swiss-Prot
Match: GLYA_NATTJ (Serine hydroxymethyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glyA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.103e-22 Identity = 59/139 (42.45%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 7 HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLK 420 H I + AV+ ++A + FK Y KQV NA L + L GY LV GG++NHL+L DL+ G+TG K E++ D +ITVNKNAV D G+R+GTPA+T+RG E + +++ + L + +T LE Q+ K K Sbjct: 261 HVIASKAVSFQEALSSEFKNYQKQVIKNASVLADELNNLGYDLVAGGSDNHLMLVDLQKKGVTGKKAERVLDDVHITVNKNAVPNDPEGPFVTSGLRLGTPAVTTRGFAEDEIKEVAQLLDKVIT-GLEDQENLEKCKK 398 The following BLAST results are available for this feature:
BLAST of CK739736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739736 ID=CK739736; Name=CK739736; organism=Citrus sinensis; type=EST; length=573bpback to top |