CK740073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14 Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 2 Query: 302 KRLQSELMALMMSGDSGISAFP-EEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQ-DKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS--------NQEEYRK 697 +RL EL + G +E N+ W+G I +G +R+ ++FP +YPFKPPK+ F+T +HPN+D G +CL ++ + W A ++ S+ +L+ +P PL + A+ +S N EE+ K Sbjct: 5 RRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGA-FRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTK 145
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14 Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 2 Query: 302 KRLQSELMALMMSGDSGISAFP-EEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQ-DKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS--------NQEEYRK 697 +RL EL + G +E N+ W+G I +G +R+ ++FP +YPFKPPK+ F+T +HPN+D G +CL ++ + W A ++ S+ +L+ +P PL + A+ +S N EE+ K Sbjct: 5 RRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGA-FRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTK 145
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14 Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 2 Query: 302 KRLQSELMALMMSGDSGISAFP-EEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQ-DKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS--------NQEEYRK 697 +RL EL + G +E N+ W+G I +G +R+ ++FP +YPFKPPK+ F+T +HPN+D G +CL ++ + W A ++ S+ +L+ +P PL + A+ +S N EE+ K Sbjct: 5 RRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGA-FRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTK 145
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.805e-14 Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 2 Query: 302 KRLQSELMALMMSGDSGISAFP-EEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQ-DKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS--------NQEEYRK 697 +RL EL + G +E N+ W+G I +G +R+ ++FP +YPFKPPK+ F+T +HPN+D G +CL ++ + W A ++ S+ +L+ +P PL + A+ +S N EE+ K Sbjct: 5 RRLMKELEEIRKCGMKNFRNIRVDEANLLTWQGLIVPDNPPYDKGA-FRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTK 145
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14 Identity = 41/125 (32.80%), Postives = 73/125 (58.40%), Query Frame = 2 Query: 302 KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVD-IYGNICLDILQDKWSSAYDVRTIL-LSIQSLLGEPNISSPLNSQAAQL 670 +R+++++M L+MS D ++ DN+ + G +T + G +++ + P++YP+K P + F FHPN+D + G++CLD++ WS +D+ I + + LL PN S PLN +AA L Sbjct: 6 RRIETDVMKLLMS-DYEVTLV--NDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAAL 127
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14 Identity = 40/130 (30.77%), Postives = 74/130 (56.92%), Query Frame = 2 Query: 305 RLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEY 691 R+Q ++ L + FP+ +++ +K I + +G + + ++YP +PPKVK T +HPN+D+ GN+CL+IL++ W+ ++ +I+ +Q L EPN PLN +AA L +N+ ++ Sbjct: 30 RIQKDINELNLPNTCATD-FPDPNDLLNFKLIISPDEGFYRDG-RFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQF 157
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13 Identity = 45/124 (36.29%), Postives = 63/124 (50.81%), Query Frame = 2 Query: 305 RLQSELMALMMSGDSGISAFPEEDNIFCWKGT----------IQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDIL----QDKWSSAYDVRTILLSIQSLLGEPN 634 R+Q EL L+ G S FP + G I+G +DTV+ + L + P YPF+PP V F T +HPN+D G ICLDIL + W + ++ T+L S++ LL EPN Sbjct: 10 RMQKELKLLLSDPPHGAS-FPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPN 132
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13 Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 302 KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVD-IYGNICLDILQDKWSSAYDVRTILLS-IQSLLGEPNISSPLNSQAAQL 670 KR + ++M LMMS D + D++ + T G D++++G +++ + P YP+K P V F +HPNVD G +CLD++ WS +D+ + S + LL PN S P N +AA L Sbjct: 6 KRREMDMMKLMMS-DYKVDTV--NDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASL 127
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13 Identity = 31/80 (38.75%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 425 FEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAA 664 ++G +++ + ++YP PPKVK +HPN+DI GN+CL+IL+ W+ ++ +IL+ +Q L PN PLN +AA Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAA 144
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13 Identity = 37/100 (37.00%), Postives = 59/100 (59.00%), Query Frame = 2 Query: 407 GSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVD-IYGNICLDILQDKWSSAYDVRTILLS-IQSLLGEPNISSPLNSQAAQLWSNQ-EEYRK 697 G + T +EG +++ + P+ YPFK P + F FHPN+D G +CLD++ W++ YD+ I S + LL PN PLN AA ++ ++ EEY++ Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQ 139 The following BLAST results are available for this feature:
BLAST of CK740073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740073 ID=CK740073; Name=CK740073; organism=Citrus sinensis; type=EST; length=700bpback to top |