CK740073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 1.785e-77 Identity = 144/171 (84.21%), Postives = 147/171 (85.96%), Query Frame = 2 Query: 188 MATVNGYQGNXXXXXXXXXXXXKQPVNTLKTVDTQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKM 700 MA VNGYQGN KQP KTVD+QSVLKRLQSELM LMM G GISAFPEEDNIFCWKGTI GSKDTVFEGTEYRLSLSF NDYPFKPPKVKFET CFHPNVD+YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN+QAAQLWSNQEEYRKM Sbjct: 1 MAAVNGYQGNTPADPPASNGS-KQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKM 170
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 7.499e-76 Identity = 140/171 (81.87%), Postives = 144/171 (84.21%), Query Frame = 2 Query: 188 MATVNGYQGNXXXXXXXXXXXXKQPVNTLKTVDTQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKM 700 MATVNGY GN KQ KTVD+ SVLKRLQSELM LMM D GISAFPEEDNIFCWKGTI GSKDTVFEGTEYRLSL+F NDYPFK PKVKFET CFHPNVD+YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN+QAAQLWSNQEEYRKM Sbjct: 1 MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKM 171
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.920e-53 Identity = 98/136 (72.06%), Postives = 113/136 (83.09%), Query Frame = 2 Query: 293 SVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKM 700 SV KRLQSELM LMM GISAFP+ DNIF W GTIQG+KDTV+E E+++SL FP DYP+KPP VKFET CFHPNVD GNICLDIL+DKWS Y+VR++L+SIQSLLGEPN SPLNS AA LWSNQ+EY+K+ Sbjct: 6 SVSKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWSNQDEYKKV 141
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.349e-51 Identity = 91/149 (61.07%), Postives = 119/149 (79.87%), Query Frame = 2 Query: 254 KQPVNTLKTVDTQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKM 700 ++P + + + SV KRLQ EL L+MSGD GI+AFP+ DN+F W T+ G KDTV+E +Y+L+L FP+DYP+KPP VKF T C+HPNVD GNICLDIL++ W+++YDVRTILLS+QSLLGEPN +SPLN+QAA +WSNQ EY+K+ Sbjct: 17 ERPRDMTTSKERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMWSNQTEYKKV 165
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 7.068e-50 Identity = 94/135 (69.63%), Postives = 106/135 (78.52%), Query Frame = 2 Query: 293 SVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRK 697 SV KRLQ ELM LMMSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T CFHPNVD +GNICLDIL+DKWS+ YDVRTILLS+QSLLGEPN SPLN AA+LW NQ Y+K Sbjct: 30 SVGKRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQTAYKK 164
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.686e-49 Identity = 92/148 (62.16%), Postives = 113/148 (76.35%), Query Frame = 2 Query: 254 KQPVNTLKTVDTQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRK 697 K +++ D +V KRL ELM LMM+ + GISAFP+ +NIF W GTI G ++TV+ G YRLSL FPN YP+ P VKF T CFHPNVD+ G ICLDIL+DKWS+ YDVRTILLSIQSLLGEPN SPLN+QAA +W++Q+EY+K Sbjct: 19 KHSDDSMPVKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQKEYKK 166
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.508e-49 Identity = 91/132 (68.94%), Postives = 104/132 (78.79%), Query Frame = 2 Query: 302 KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRK 697 KRLQ ELM LMMSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKK 164
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.508e-49 Identity = 91/132 (68.94%), Postives = 104/132 (78.79%), Query Frame = 2 Query: 302 KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRK 697 KRLQ ELM LMMSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKK 164
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.021e-48 Identity = 90/132 (68.18%), Postives = 104/132 (78.79%), Query Frame = 2 Query: 302 KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRK 697 KRLQ ELM LMMSGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL++KWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKK 164
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.274e-48 Identity = 90/132 (68.18%), Postives = 103/132 (78.03%), Query Frame = 2 Query: 302 KRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRK 697 KRLQ ELM LM SGD GISAFPE DN+F W GTI G+ TV+E Y+LSL FP+ YP+ P VKF T C+HPNVD GNICLDIL+DKWS+ YDVRTILLSIQSLLGEPNI SPLN+ AA+LW N ++K Sbjct: 33 KRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKK 164 The following BLAST results are available for this feature:
BLAST of CK740073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740073 ID=CK740073; Name=CK740073; organism=Citrus sinensis; type=EST; length=700bpback to top |