CK740073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2S_DROVI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila virilis GN=GJ15767 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12 Identity = 39/124 (31.45%), Postives = 63/124 (50.81%), Query Frame = 2 Query: 299 LKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL 670 ++++ EL + + GI E ++ + I G T + +R+ L+ D+P PPK F T FHPNV G IC++ L+ W ++ ILL+I+ LL PN S LN +A ++ Sbjct: 16 IRQVMKELQDMETTPPEGIKVLINESDVTDIQAFIDGPAGTPYAVGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKM 139
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2S_DROGR (Ubiquitin-conjugating enzyme E2 S OS=Drosophila grimshawi GN=GH12079 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12 Identity = 39/124 (31.45%), Postives = 63/124 (50.81%), Query Frame = 2 Query: 299 LKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL 670 ++++ EL + + GI E ++ + I G T + +R+ L+ D+P PPK F T FHPNV G IC++ L+ W ++ ILL+I+ LL PN S LN +A ++ Sbjct: 16 IRQVMKELQDMESTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKM 139
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12 Identity = 37/120 (30.83%), Postives = 63/120 (52.50%), Query Frame = 2 Query: 305 RLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAA 664 RL ++ L + IS +D++ ++ +I+ GT + + YP + PKVK +T +HPN+D+ GN+CL+IL++ W ++ T++ + L EPN PLN AA Sbjct: 34 RLHKDISELNLPSSCSISFPNGKDDLMNFEVSIKPDDGYYHNGT-FVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAA 152
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPS (Ubiquitin-conjugating enzyme E2 S OS=Drosophila pseudoobscura pseudoobscura GN=GA22810 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 39/124 (31.45%), Postives = 63/124 (50.81%), Query Frame = 2 Query: 299 LKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL 670 ++++ EL + + GI E ++ + I G T + +R+ L+ D+P PPK F T FHPNV G IC++ L+ W ++ ILL+I+ LL PN S LN +A ++ Sbjct: 16 IRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKM 139
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis GN=GL16001 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 39/124 (31.45%), Postives = 63/124 (50.81%), Query Frame = 2 Query: 299 LKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL 670 ++++ EL + + GI E ++ + I G T + +R+ L+ D+P PPK F T FHPNV G IC++ L+ W ++ ILL+I+ LL PN S LN +A ++ Sbjct: 16 IRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKM 139
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC84_DROME (Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophila melanogaster GN=Ubc84D PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 39/124 (31.45%), Postives = 64/124 (51.61%), Query Frame = 2 Query: 299 LKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQ-DKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ 667 L R S+L+ MS I + ++++ W G + K +G +R+ ++FP YPF PPK+ F+T +HPNVD G +CL I+ D W +L ++ +++ P PL S A+ Sbjct: 7 LTRELSDLVEAKMSTLRNIES--SDESLLMWTGLLVPEKAPYNKGA-FRIEINFPPQYPFMPPKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAE 127
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 287 TQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFET--GCFHPNVDIYGNICL---DILQDKWSSAYDVRTILLSIQSLL 622 T+ KRL E ++ + I A P EDNI W I G DT ++G +Y +L+FP+DYP+KPP ++ T G F PN +CL D D W+ + V TIL + S + Sbjct: 3 TKQAHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKPNT----RLCLSMSDYHPDTWNPGWSVSTILNGLLSFM 115
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12 Identity = 40/118 (33.90%), Postives = 60/118 (50.85%), Query Frame = 2 Query: 287 TQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGC-FHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNI 637 T+ RLQ E M + SG DN+ W + G T++ Y+L + FP YP + P+V F+ HP++ G+ICLD+L D WS A + +I LSI S+L ++ Sbjct: 13 TKIATNRLQKEFMEWQTNPPSGFK-HRVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSV 129
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 42/121 (34.71%), Postives = 63/121 (52.07%), Query Frame = 2 Query: 305 RLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGC-FHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAA 664 RLQ EL ++ +G DN+ W + G+ T++ Y+L + FP YP + P+V F + HP++ G+ICLDIL D WS A V ++ +SI S+L SSP + A Sbjct: 19 RLQKELSEWQLNPPTGFR-HKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLS----SSPAKQRPA 134
BLAST of CK740073 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11 Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 305 RLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKF-ETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLL 622 RLQ EL+ M+ +G DN+ W + G+ T++ Y+L + FP YP + P+V F HP++ G+ICLDIL D WS A V +I +SI S+L Sbjct: 19 RLQKELVEWQMNPPTGFK-HKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124 The following BLAST results are available for this feature:
BLAST of CK740073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740073 ID=CK740073; Name=CK740073; organism=Citrus sinensis; type=EST; length=700bpback to top |