CK740116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP3_ORYSJ (Poly [ADP-ribose] polymerase 3 OS=Oryza sativa subsp. japonica GN=PARP3 PE=2 SV=1) HSP 1 Score: 48.1358 bits (113), Expect = 1.470e-12 Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 24 LEALQDIEIASRLVG--FDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLI 167 LE ++DI +ASRL+G F DD L + YKKL C I + DSEDY++I Sbjct: 571 LETVRDINVASRLIGDVFGSTLDDPLSQCYKKLGCSINRVVEDSEDYKMI 620 HSP 2 Score: 44.669 bits (104), Expect = 1.470e-12 Identity = 29/96 (30.21%), Postives = 46/96 (47.92%), Query Frame = 2 Query: 170 KYLHTTHAPTHTD---WSLELEEVFSLEREGEFDKFSSYQ--RKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KYL T+ P +S +E ++++E SY +KL N++LLW G+R +N + L GYMFGK I +D +++A Sbjct: 622 KYLEKTYEPVKVGDVVYSATVERIYAVESSA----LPSYDEIKKLPNKVLLWCGTRSSNLLRHLRDGFVPAVCHIPVPGYMFGKAIVCSDAAAEAA 713
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP3_SOYBN (Poly [ADP-ribose] polymerase 3 OS=Glycine max GN=PARP3 PE=2 SV=1) HSP 1 Score: 46.9802 bits (110), Expect = 5.426e-12 Identity = 30/96 (31.25%), Postives = 49/96 (51.04%), Query Frame = 2 Query: 170 KYLHTTHAPTHT---DWSLELEEVFSLEREGEFDKFSSYQR--KLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KYL T+ P ++ + +E +F+++ G SY+ KL N++LLW GSR +N + L + GYMFGK I +D +++A Sbjct: 605 KYLEKTYEPVKVGDIEYGVSVENIFAVQTGG----CPSYEDIIKLPNKVLLWCGSRSSNLLRHLQKGFLPAICSLPIPGYMFGKAIVCSDAAAEAA 696 HSP 2 Score: 43.8986 bits (102), Expect = 5.426e-12 Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 3 Query: 24 LEALQDIEIASRLVGFDVDS--DDSLDEKYKKLRCDIAPLPHDSEDYQLI 167 LE ++DI AS L+G S DD L E YKKL C I+ L S+DY++I Sbjct: 554 LEGVRDITQASHLIGDMTGSTIDDPLSETYKKLGCSISALDKSSDDYEMI 603
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP3_MEDTR (Putative poly [ADP-ribose] polymerase 3 OS=Medicago truncatula GN=PARP3 PE=3 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 7.049e-12 Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 3 Query: 24 LEALQDIEIASRLVGFDVDS--DDSLDEKYKKLRCDIAPLPHDSEDYQLI 167 LE ++DI +AS L+G S DD L + YKKL C I PL +S DY++I Sbjct: 541 LEGVRDITLASHLIGDMSGSTIDDPLSDTYKKLGCSITPLEKNSNDYEMI 590 HSP 2 Score: 44.2838 bits (103), Expect = 7.049e-12 Identity = 29/96 (30.21%), Postives = 47/96 (48.96%), Query Frame = 2 Query: 170 KYLHTTHAPTHT---DWSLELEEVFSLEREGEFDKFSSYQR--KLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KYL T+ P ++ + +E +F++E SY K+ N++LLW GSR +N + L + GYMFGK I +D +++A Sbjct: 592 KYLEKTYEPVKVGDIEYGVSVENIFTVESSA----CPSYADIVKMPNKVLLWCGSRSSNLLRHLHKGFLPAICSLPVPGYMFGKAIVCSDAAAEAA 683
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP3_ARATH (Poly [ADP-ribose] polymerase 3 OS=Arabidopsis thaliana GN=PARP3 PE=2 SV=1) HSP 1 Score: 46.595 bits (109), Expect = 1.541e-11 Identity = 28/96 (29.17%), Postives = 50/96 (52.08%), Query Frame = 2 Query: 170 KYLHTTHAP---THTDWSLELEEVFSLEREG--EFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KYL TT+ P + ++ + ++ VF++E + D +KL N++LLW GSR +N + + + GYMFG+ I +D +++A Sbjct: 606 KYLETTYEPVKVSDVEYGVSVQNVFAVESDAIPSLDDI----KKLPNKVLLWCGSRSSNLLRHIYKGFLPAVCSLPVPGYMFGRAIVCSDAAAEAA 697 HSP 2 Score: 42.743 bits (99), Expect = 1.541e-11 Identity = 22/50 (44.00%), Postives = 34/50 (68.00%), Query Frame = 3 Query: 27 EALQDIEIASRLVGFDVDSD---DSLDEKYKKLRCDIAPLPHDSEDYQLI 167 E ++DI ASRL+G D+ D D L ++YKKL C I+ + +SEDY+++ Sbjct: 556 ETVRDINTASRLIG-DMRGDTLDDPLSDRYKKLGCKISVVDKESEDYKMV 604 The following BLAST results are available for this feature:
BLAST of CK740116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740116 ID=CK740116; Name=CK740116; organism=Citrus sinensis; type=EST; length=443bpback to top |