CK740116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP1_ARATH (Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 3.437e-58 Identity = 67/91 (73.63%), Postives = 76/91 (83.52%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KYL+TTHAPTHT+WSLELEEVF+LEREGEFDK++ ++ KL N+MLLWHGSR+TNFVGIL Q TGYMFGKGIYFADLVSKSA Sbjct: 786 KYLNTTHAPTHTEWSLELEEVFALEREGEFDKYAPHREKLGNKMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSKSA 876 HSP 2 Score: 103.605 bits (257), Expect = 3.437e-58 Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 3 Query: 3 FKSKVKMLEALQDIEIASRLVGFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIE 170 FKSKVKMLEALQDIEIASR+VGFDVDS +SLD+KYKKL CDI+PLPHDSEDY+LIE Sbjct: 730 FKSKVKMLEALQDIEIASRIVGFDVDSTESLDDKYKKLHCDISPLPHDSEDYRLIE 785
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP1_ORYSJ (Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica GN=PARP1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.345e-52 Identity = 62/91 (68.13%), Postives = 72/91 (79.12%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KYL THAPTH +WSLELEEVFSL+R+GEF K+S Y+ L N+MLLWHGSR+TN+VGIL+Q TGYMFGKG+YFADLVSKSA Sbjct: 780 KYLLNTHAPTHKEWSLELEEVFSLDRDGEFSKYSRYKNNLHNKMLLWHGSRLTNYVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSA 870 HSP 2 Score: 92.8189 bits (229), Expect = 3.345e-52 Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 3 Query: 12 KVKMLEALQDIEIASRLVGFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIE 170 KVKMLEALQDIEIAS+LVGFD D+D+SLD+KYKKLRC I PLPHD EDY+L+E Sbjct: 727 KVKMLEALQDIEIASKLVGFDSDNDESLDDKYKKLRCAITPLPHDCEDYKLVE 779
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP1_MAIZE (Poly [ADP-ribose] polymerase 1 OS=Zea mays GN=PARP1 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 4.737e-51 Identity = 62/91 (68.13%), Postives = 72/91 (79.12%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 +YL THAPTH DWSLELEEVFSL+R+GE +K+S Y+ L N+MLLWHGSR+TNFVGIL+Q TGYMFGKG+YFADLVSKSA Sbjct: 783 QYLLNTHAPTHKDWSLELEEVFSLDRDGELNKYSRYKNNLHNKMLLWHGSRLTNFVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSA 873 HSP 2 Score: 89.7373 bits (221), Expect = 4.737e-51 Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 3 Query: 12 KVKMLEALQDIEIASRLVGFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIE 170 K KMLEALQDIEIAS++VGFD DSD+SLD+KY KL CDI PL HDSEDY+LIE Sbjct: 730 KAKMLEALQDIEIASKIVGFDSDSDESLDDKYMKLHCDITPLAHDSEDYKLIE 782
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP2_MAIZE (Poly [ADP-ribose] polymerase 2 OS=Zea mays GN=PARP2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.054e-30 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 2 Query: 173 YLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 YL TH TH+ +++++ ++F + R GE ++F + +NRMLLWHGSR++N+ GIL+Q TGYMFGKG+YFAD+ SKSA Sbjct: 456 YLRNTHGKTHSGYTVDIVQIFKVSRHGETERFQKFA-STRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSA 544 HSP 2 Score: 56.6102 bits (135), Expect = 5.054e-30 Identity = 28/57 (49.12%), Postives = 42/57 (73.68%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIASRLVGFDV-DSDDSLDEKYKKLRCDIAPLPHDSEDYQLIES 173 K+K++M+EAL +IEIA++L+ D D DD L +YK+L CD PL DS++Y +I+S Sbjct: 399 KAKLEMVEALGEIEIATKLLEDDSSDQDDPLYARYKQLHCDFTPLEADSDEYSMIKS 455
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PRP2A_ORYSJ (Poly [ADP-ribose] polymerase 2-A OS=Oryza sativa subsp. japonica GN=PARP2-A PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.452e-29 Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 173 YLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 YL TH THT +++++ ++F + R GE ++F + NRMLLWHGSR+TN+ GIL+Q TGYMFGKG+YFAD+ SKSA Sbjct: 463 YLANTHGKTHTSYTVDVVQIFKVSRHGEMERFQKFATA-GNRMLLWHGSRLTNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSA 551 HSP 2 Score: 53.9138 bits (128), Expect = 1.452e-29 Identity = 27/57 (47.37%), Postives = 41/57 (71.93%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIASRLVGFD-VDSDDSLDEKYKKLRCDIAPLPHDSEDYQLIES 173 K+K++M+EAL +IEIA++L+ D D DD L +YK+L CD PL SE+Y +I++ Sbjct: 406 KAKLEMVEALGEIEIATKLLEDDSTDQDDPLYARYKQLSCDFTPLEVGSEEYSMIKT 462
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP2_MOUSE (Poly [ADP-ribose] polymerase 2 OS=Mus musculus GN=Parp2 PE=1 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 1.456e-29 Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 +YL +THAPTH D+++ L +VF +E+EGE + F + L NRMLLWHGSR++N+VGIL+ TGYMFGKGIYFAD+ SKSA Sbjct: 360 QYLQSTHAPTHKDYTMTLLDVFEVEKEGEKEAF---REDLPNRMLLWHGSRLSNWVGILSHGLRVAPPEAPITGYMFGKGIYFADMSSKSA 447 HSP 2 Score: 47.7506 bits (112), Expect = 1.456e-29 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 3 Query: 12 KVKMLEALQDIEIASRLVGFDVDS-DDSLDEKYKKLRCDIAPLPHDSEDYQLI 167 KVK+LEAL DIEIA +LV + + LD+ Y+ L C + PL H+S ++++I Sbjct: 306 KVKLLEALGDIEIALKLVKSERQGLEHPLDQHYRNLHCALRPLDHESNEFKVI 358
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP1_RAT (Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus GN=Parp1 PE=2 SV=4) HSP 1 Score: 105.916 bits (263), Expect = 1.880e-29 Identity = 51/91 (56.04%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KY+ THA TH + LE+ ++F +EREGE ++ + R+L NR LLWHGSR TNF GIL+Q TGYMFGKGIYFAD+VSKSA Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPF-RQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSA 905 HSP 2 Score: 43.8986 bits (102), Expect = 1.880e-29 Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLI 167 ++KV+ML+ L DIE+A L+ G D S D +D Y+KL+ DI + DSE+ ++I Sbjct: 759 QAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVI 814
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP1_MOUSE (Poly [ADP-ribose] polymerase 1 OS=Mus musculus GN=Parp1 PE=1 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 1.880e-29 Identity = 51/91 (56.04%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KY+ THA TH + LE+ ++F +EREGE ++ + R+L NR LLWHGSR TNF GIL+Q TGYMFGKGIYFAD+VSKSA Sbjct: 815 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPF-RQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSA 904 HSP 2 Score: 43.8986 bits (102), Expect = 1.880e-29 Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLI 167 ++KV+ML+ L DIE+A L+ G D S D +D Y+KL+ DI + DSE+ ++I Sbjct: 758 QAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVI 813
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP1_BOVIN (Poly [ADP-ribose] polymerase 1 OS=Bos taurus GN=PARP1 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.186e-29 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KY+ THA TH + LE+ ++F +EREGE ++ + ++L NR LLWHGSR TNF GIL+Q TGYMFGKGIYFAD+VSKSA Sbjct: 818 KYVKNTHATTHNAYDLEVVDIFKIEREGESQRYKPF-KQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSA 907 HSP 2 Score: 43.8986 bits (102), Expect = 3.186e-29 Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLI 167 ++KV+ML+ L DIE+A L+ G D S D +D Y+KL+ DI + DSE+ ++I Sbjct: 761 QAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDKDSEEAEII 816
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP1_CRIGR (Poly [ADP-ribose] polymerase 1 OS=Cricetulus griseus GN=PARP1 PE=2 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 3.186e-29 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KY+ THA TH + LE+ ++F +EREGE ++ + ++L NR LLWHGSR TNF GIL+Q TGYMFGKGIYFAD+VSKSA Sbjct: 815 KYVKNTHATTHNAYDLEVMDIFKIEREGESQRYKPF-KQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSA 904 HSP 2 Score: 43.8986 bits (102), Expect = 3.186e-29 Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLI 167 ++KV+ML+ L DIE+A L+ G D S D +D Y+KL+ DI + DSE+ ++I Sbjct: 758 QAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVI 813 The following BLAST results are available for this feature:
BLAST of CK740116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740116 ID=CK740116; Name=CK740116; organism=Citrus sinensis; type=EST; length=443bpback to top |