CK932947
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932947 vs. ExPASy Swiss-Prot
Match: FPPS_KLULA (Farnesyl pyrophosphate synthetase OS=Kluyveromyces lactis GN=FPS1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28 Identity = 64/103 (62.14%), Postives = 75/103 (72.82%), Query Frame = 2 Query: 434 GKLNRGLSVVDSYRLLKEGK---ELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVD 733 GKLNRGLSVVD+Y LLK K EL+ +E+ + LGWCIE LQAYFLV DD+MD S TRRGQPCW++V VG IA ND +L I +LK HFR +PYYVD Sbjct: 47 GKLNRGLSVVDTYALLKGYKSVSELSAEEYKKVAILGWCIELLQAYFLVADDMMDQSITRRGQPCWYKVENVGDIAINDAFMLEGAIYCLLKKHFRTEPYYVD 149
BLAST of CK932947 vs. ExPASy Swiss-Prot
Match: FPPS_YEAST (Farnesyl pyrophosphate synthetase OS=Saccharomyces cerevisiae GN=FPP1 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28 Identity = 60/102 (58.82%), Postives = 78/102 (76.47%), Query Frame = 2 Query: 434 GKLNRGLSVVDSYRLL--KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVD 733 GKLNRGLSVVD+Y +L K ++L +E+ + LGWCIE LQAYFLV DD+MD S TRRGQPCW++VP+VG IA ND +L I ++LK+HFR++ YY+D Sbjct: 51 GKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIYKLLKSHFRNEKYYID 152
BLAST of CK932947 vs. ExPASy Swiss-Prot
Match: FPPS_NEUCR (Farnesyl pyrophosphate synthetase OS=Neurospora crassa GN=fpp PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.710e-25 Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 2 Query: 410 SLPIVFLAGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVD 733 SL + L GK NRG+SV DS +L G+ LT++E+F ++ LGW E LQA+FLV DDIMD S TRRG+PCW+R VGM+A ND +L + I +LK +FR P YVD Sbjct: 41 SLEVNTLGGKCNRGMSVPDSASILL-GRPLTEEEYFQAATLGWMTELLQAFFLVSDDIMDSSITRRGKPCWYRQEGVGMVAINDAFMLESAIYTLLKKYFRSHPRYVD 147
BLAST of CK932947 vs. ExPASy Swiss-Prot
Match: FPPS_GIBFU (Farnesyl pyrophosphate synthetase OS=Gibberella fujikuroi GN=FPPS PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.710e-25 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 2 Query: 410 SLPIVFLAGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVD 733 SL + L GK NRG+SV DS LL E K LT++++F ++ LGW E LQA+FLV DDIMD S TRRGQPCW+R VGMIA ND +L + I +LK +FR P Y D Sbjct: 41 SLEVNPLGGKCNRGMSVPDSVSLLLE-KPLTEEQYFQAATLGWMTELLQAFFLVSDDIMDSSITRRGQPCWYRQEGVGMIAINDAFMLESAIYTLLKKYFRSHPAYFD 147
BLAST of CK932947 vs. ExPASy Swiss-Prot
Match: FPPS_SCHPO (Farnesyl pyrophosphate synthetase OS=Schizosaccharomyces pombe GN=fps1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.502e-24 Identity = 53/102 (51.96%), Postives = 70/102 (68.63%), Query Frame = 2 Query: 428 LAGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVD 733 L GK NRGLSV+DSY +L G L + + ++ LGW +E LQ++FL+ DDIMD S TRRGQPCW+ +P VG IA ND ++ + I +LK HFR + YVD Sbjct: 47 LGGKYNRGLSVIDSYEILL-GHPLDEAAYMKAAVLGWMVELLQSFFLIADDIMDASKTRRGQPCWYLMPGVGNIAINDAFMVESAIYFLLKKHFRQESCYVD 147
BLAST of CK932947 vs. ExPASy Swiss-Prot
Match: FPPS_BOVIN (Farnesyl pyrophosphate synthetase OS=Bos taurus GN=FDPS PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.946e-23 Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = 2 Query: 428 LAGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVD 733 + GK NRGL+VV ++R L E + D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND LL + I R+LK + R++PYY+D Sbjct: 54 IGGKYNRGLTVVITFRELVEPGKQDPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQTCWYQKPGIGLDAINDAFLLESSIYRLLKLYCREQPYYLD 155
BLAST of CK932947 vs. ExPASy Swiss-Prot
Match: FPPS_RAT (Farnesyl pyrophosphate synthetase OS=Rattus norvegicus GN=Fdps PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.038e-22 Identity = 49/102 (48.04%), Postives = 73/102 (71.57%), Query Frame = 2 Query: 428 LAGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVD 733 + GK NRGL+VV +++ L E ++ + + +GWC+E LQA+FLVLDDIMD S+TRRGQ CW++ P +G+ A ND +LL I R+LK + R++PYY++ Sbjct: 54 VGGKYNRGLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDIMDSSYTRRGQICWYQKPGIGLDAINDALLLEAAIYRLLKFYCREQPYYLN 155
BLAST of CK932947 vs. ExPASy Swiss-Prot
Match: FPPS_MOUSE (Farnesyl pyrophosphate synthetase OS=Mus musculus GN=Fdps PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22 Identity = 50/102 (49.02%), Postives = 71/102 (69.61%), Query Frame = 2 Query: 428 LAGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVD 733 L GK NRGL+VV +++ L E K+ + + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND +LL I R+LK + R++PYY++ Sbjct: 54 LGGKYNRGLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQPYYLN 155
BLAST of CK932947 vs. ExPASy Swiss-Prot
Match: FPPS_HUMAN (Farnesyl pyrophosphate synthetase OS=Homo sapiens GN=FDPS PE=1 SV=4) HSP 1 Score: 103.605 bits (257), Expect = 1.147e-21 Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = 2 Query: 428 LAGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVD 733 + GK NRGL+VV ++R L E ++ D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P VG+ A ND LL I R+LK + R++PYY++ Sbjct: 120 IGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLN 221
BLAST of CK932947 vs. ExPASy Swiss-Prot
Match: FPPS_CHICK (Farnesyl pyrophosphate synthetase OS=Gallus gallus GN=FDPS PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 50/99 (50.51%), Postives = 65/99 (65.66%), Query Frame = 2 Query: 434 GKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYV 730 GK NRGL+VV +YR L + + + A+GWCIE QA+FLV DDIMD S TRRGQ CW++ VG+ A ND LL + + R+LK + R +PYYV Sbjct: 70 GKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAFFLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYV 168 The following BLAST results are available for this feature:
BLAST of CK932947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932947 ID=CK932947; Name=CK932947; organism=Citrus sinensis; type=EST; length=735bpback to top |