CK933311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.960e-25 Identity = 64/172 (37.21%), Postives = 98/172 (56.98%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMM-LPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGY-DRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIE 586 YD T FSP+GR++Q+EYA +++ ++GT IGI DGIV+ E+ + S ++ S +++ ++ +AVAGL AD ++ A+ A NY Y E IPV+ L +R++ T + LRPFG I GY DR G QLY PSG + ++G AA+T ++ Sbjct: 6 YDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQ 177
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.559e-25 Identity = 61/172 (35.47%), Postives = 101/172 (58.72%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 YD ++T FSPDG +FQ+EYA +AV T +GI+ + +V+GVEK +K+ + R+I ++ H MA AGL AD R ++ RA+ E +++ +P+ V+ + + +A+ T RPFG ++ G+D DG P+LY +PSG + + AIG+ + + +EK Sbjct: 5 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEK 176
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 3.343e-25 Identity = 60/172 (34.88%), Postives = 102/172 (59.30%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 YD ++T FSPDG +FQ+EYA +A+ T +G++ +D +V+GVEK +K+ + R+I ++ + MA AGL AD R ++ RA+ E ++ + + V+ + + +AS T RPFG ++ G+D DG P+LY +PSG + + AIG+G ++ + +EK Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAIKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEK 174
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA1_TRYCR (Proteasome subunit alpha type-1 OS=Trypanosoma cruzi PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.343e-25 Identity = 62/171 (36.26%), Postives = 93/171 (54.39%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 YD + TT+SP GR+FQ+EYA +AV+N +G K KD +V+ K + ++ + H GMA+AGL ADGR + ++E NY ++ P+ +A+ V + RPFG G+++ GYD GP LY PSG + + A+G QAA+T +EK Sbjct: 6 YDTNTTTWSPTGRLFQVEYANEAVNNGSAAVGAKNKDFVVLTALKR-SPVAQFSSYQEKVFKLDDHVGMAIAGLVADGRMLARFVRTECMNYRYMHDSDNPLPLIAEIVGEKYQRHIQFAGKRPFGVGLLIAGYDSTGPHLYHTVPSGDVFDFKATAMGLRSQAARTYLEK 175
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA2_CAEEL (Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.366e-25 Identity = 60/177 (33.90%), Postives = 100/177 (56.50%), Query Frame = 2 Query: 65 IGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRD--GPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 +G Y S+TTFSP G++ QIEYA AV N +G++ KDG+V+ E + + +L ++ + +H G +G+ D R +V +A+ A YE +YGE +P +L +A+ + T +RPFG +++ G+D++ P L+ +PSG + + A+GK AKT +EK Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVGS---VLTDDQPKVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEK 174
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA1_SCHPO (Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces pombe GN=SPAC6G10.04c PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.702e-25 Identity = 60/171 (35.09%), Postives = 95/171 (55.56%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 YD TT+SP GR+ Q+EYA +A+ +G+ K V+ K A + L +++ + H G+A+AGLA D R + K EA + ++++ PIPV+ L +VA + T + RP+G G ++ GYD GP L +PSG+ Y G ++G Q+A+T IE+ Sbjct: 6 YDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEE--LSSYQKKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIER 174
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 9.726e-25 Identity = 59/176 (33.52%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 68 GTGYDLSVTTFSPDGRVFQIEYAAKAVDNSG-TVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFG-CGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 G GYD +T FSP+GR+FQ+EYA KAV +G T IG++ KD + + +K + K++ S + + ++ G+ G+ AD R +V +A+++A + YG +PV LA+ +A + T + ++RP G +++G + +GP LY +P+G Y + + G Q A +EK Sbjct: 6 GAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEK 181
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA2_YEAST (Proteasome component Y7 OS=Saccharomyces cerevisiae GN=PRE8 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.270e-24 Identity = 70/215 (32.56%), Postives = 116/215 (53.95%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEA-TNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDES 715 Y S+TTFSP G++ QI+YA AV T +GIK +G+V+ EK +S + + + ++ + G +G+ D R +V +++ A T+Y+ +YGE P K L VA + T +RPFG +++ G+D +G LY ++PSG + + AIGKG AAKT +EK E+ + I +A + E + +E++ + DE+ Sbjct: 5 YSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELEL-EDAIHIALLTLKESVEGEFNGDTIELAIIGDEN 218
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.659e-24 Identity = 58/162 (35.80%), Postives = 90/162 (55.56%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGR 562 YD +T FSPDGR++Q+EYA +AV IG++ +G+V+ V+K S ++ S ++H + H G A AG AD RQ+V A+ ++ Y EPI V+ L + V ++ T RPFG +++ G + P+L+ +PSG S + AIG R Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVEGGEPRLFETDPSGTSNEWKAVAIGSNR 171
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.659e-24 Identity = 58/162 (35.80%), Postives = 90/162 (55.56%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGR 562 YD +T FSPDGR++Q+EYA +AV IG++ +G+V+ V+K S ++ S ++H + H G A AG AD RQ+V A+ ++ Y EPI V+ L + V ++ T RPFG +++ G + P+L+ +PSG S + AIG R Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVEGGEPRLFETDPSGTSNEWKAVAIGSNR 171 The following BLAST results are available for this feature:
BLAST of CK933311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933311 ID=CK933311; Name=CK933311; organism=Citrus sinensis; type=EST; length=944bpback to top |