CK933311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_SPIOL (Proteasome subunit alpha type-3 OS=Spinacia oleracea GN=PAG1 PE=2 SV=1) HSP 1 Score: 441.039 bits (1133), Expect = 4.536e-123 Identity = 212/228 (92.98%), Postives = 221/228 (96.93%), Query Frame = 2 Query: 56 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGT +GIKCKDGIV+GVEKLI SKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIV RAKSEATNYESVYGE +PVKELA RVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM+EPSGISYRYFGAAIGKG+QAAKTEIEKLKLSEMTCR+G+IEVAKIIY VHDEAKDKAFELEMSW+CDES R+HQKVP Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTAVGIKCKDGIVLGVEKLIQSKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVARAKSEATNYESVYGEAVPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGISYRYFGAAIGKGKQAAKTEIEKLKLSEMTCREGIIEVAKIIYKVHDEAKDKAFELEMSWICDESKREHQKVP 228
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_ARATH (Proteasome subunit alpha type-3 OS=Arabidopsis thaliana GN=PAG1 PE=1 SV=2) HSP 1 Score: 433.721 bits (1114), Expect = 7.242e-121 Identity = 208/228 (91.23%), Postives = 222/228 (97.37%), Query Frame = 2 Query: 56 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTV+GIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRH+GMAVAGLAADGRQIV RAKSEA +YESVYG+ +PVKEL++RVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKG+QAAKTEIEKL LSEMTC++GVIEVAKIIY +HDEAKDKAFELEMSW+C+ES R+HQKVP Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEKLNLSEMTCKEGVIEVAKIIYKLHDEAKDKAFELEMSWICEESKREHQKVP 228
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1) HSP 1 Score: 431.795 bits (1109), Expect = 2.752e-120 Identity = 204/228 (89.47%), Postives = 220/228 (96.49%), Query Frame = 2 Query: 56 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 MSSIGTGYDLSVTTFSPDGRVFQ+EYA KAVDNSGTV+GIKCKDGIV+GVEKL+ SKMML GSNRRIHSVH HSG+AVAGLAADGRQIV+RAKSEA +YE VYGEPI VKELA RVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSG+SY+YFGAA+GKGRQAAKTEIEKLKLSE+TCR+G++EVAKIIYGVHDEAKDKAFELE+SW+CDESNRQHQKVP Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVAKIIYGVHDEAKDKAFELELSWICDESNRQHQKVP 228
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_ACACA (Proteasome subunit alpha type-3 (Fragment) OS=Acanthamoeba castellanii PE=2 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 1.427e-84 Identity = 150/226 (66.37%), Postives = 187/226 (82.74%), Query Frame = 2 Query: 62 SIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 SIGTGYDLS TTFSPDGRVFQ+EYAAKAVDNSGT +G++ KDG+V+ VEKL+ SKM++P +NRRIH+V RH G+A++GL ADGRQ+V+R ++EAT+Y YG I K L +R++++V L +LY +RPFG VILG D++GPQLYMIEPSGIS+ YFG AIGKG +AAKTEIEKLKLSEMT R+ + E AKIIY VHD+AKDKAFELE+SWVC+E+ H+ VP Sbjct: 1 SIGTGYDLSSTTFSPDGRVFQVEYAAKAVDNSGTALGLRVKDGVVLAVEKLLVSKMLVPNTNRRIHTVDRHCGLAMSGLVADGRQLVSRGRAEATSYREFYGTDISGKVLNERLSNFVQLYSLYGSVRPFGTSVILGCVDKNGPQLYMIEPSGISWGYFGVAIGKGARAAKTEIEKLKLSEMTAREAIKEAAKIIYSVHDDAKDKAFELELSWVCEETGNLHKFVP 226
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_DICDI (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum GN=psmA3 PE=2 SV=2) HSP 1 Score: 308.531 bits (789), Expect = 3.514e-83 Identity = 138/228 (60.53%), Postives = 185/228 (81.14%), Query Frame = 2 Query: 56 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 MSS+G+GYDL V+T+SPDG++FQ++YA KAV+NSGT++ IK KDG+V+GVEKL+ SKM+ GSNRR+H + H G+A+AG AD RQ++TRA+SEA NY+S YG+PIP+K L+QR+ASY H+ TLY +RPFGC + + G D+ GPQL+++EPSG YFGA++GKG+QAAK E+EK+K SEMTCR+ + EV++IIY VHDE KDK FELE+ W+ E+N HQ VP Sbjct: 1 MSSVGSGYDLYVSTYSPDGKLFQVDYANKAVENSGTLVAIKAKDGVVLGVEKLVPSKMLCSGSNRRVHHIDTHVGVAIAGFLADARQLITRARSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGSVRPFGCSIAITGIDQYGPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEKIKFSEMTCREAIKEVSRIIYSVHDEVKDKDFELELGWISTETNNVHQIVP 228
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 301.212 bits (770), Expect = 5.610e-81 Identity = 151/229 (65.94%), Postives = 179/229 (78.17%), Query Frame = 2 Query: 56 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 MSSIGTGYDLS +TFSPDGRVFQ+EYA KAV+NS T IGI+CKDG+V GVEKL+ SK+ GSN+R+ +V RH GMAVAGL AD R + A+ EA+N+ S +G IP+K LA RVA YVH TLY +RPFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAKTEIEKL++ EMTCR V EVAKIIY VHDE KDKAFELE+SWV + +N +H+ VP Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGEITNGRHEIVP 229
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 300.827 bits (769), Expect = 7.327e-81 Identity = 151/229 (65.94%), Postives = 179/229 (78.17%), Query Frame = 2 Query: 56 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 MSSIGTGYDLS +TFSPDGRVFQ+EYA KAV+NS T IGI+CKDG+V GVEKL+ SK+ GSN+R+ +V RH GMAVAGL AD R + A+ EA+N+ S +G IP+K LA RVA YVH TLY +RPFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAKTEIEKL++ EMTCR V EVAKIIY VHDE KDKAFELE+SWV + +N +H+ VP Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVP 229
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 298.901 bits (764), Expect = 2.784e-80 Identity = 150/229 (65.50%), Postives = 178/229 (77.73%), Query Frame = 2 Query: 56 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 MSSIGTGYDLS +TFSPDGRVFQ+EYA KAV+NS T IGI+CKDG+V GVEKL+ SK+ GSN+R+ +V RH GMAVAGL AD R + A+ EA+N+ S +G IP+K LA RVA YVH TLY +RPFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAKTEIEKL++ EMTCR V EVAKIIY VHDE KDKAFELE+SWV + + +H+ VP Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGELTKGRHEIVP 229
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_MOUSE (Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3) HSP 1 Score: 298.901 bits (764), Expect = 2.784e-80 Identity = 150/229 (65.50%), Postives = 178/229 (77.73%), Query Frame = 2 Query: 56 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 MSSIGTGYDLS +TFSPDGRVFQ+EYA KAV+NS T IGI+CKDG+V GVEKL+ SK+ GSN+R+ +V RH GMAVAGL AD R + A+ EA+N+ S +G IP+K LA RVA YVH TLY +RPFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAKTEIEKL++ EMTCR V EVAKIIY VHDE KDKAFELE+SWV + + +H+ VP Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGELTKGRHEIVP 229
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_SCHPO (Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces pombe GN=SPCC1795.04c PE=1 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 4.466e-62 Identity = 117/228 (51.32%), Postives = 155/228 (67.98%), Query Frame = 2 Query: 56 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 MSSIGTGYDL + FSPDGR+FQ EYA KAV+N+ T IGIKC+DG+++ +EK++ SK++ P N RI SV RH G+A G DG+ IV RA+ EAT++ YG PIP +A R+ +YV L T Y +RPFG + YD +GP LYM+EP+G+ + Y GAA GKGRQ A+ E+EKL S + + V E A+I+Y HDE +K E+EM+WV E+N H VP Sbjct: 1 MSSIGTGYDLGLF-FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEAARILYATHDEENNKEHEIEMTWVGVETNGIHTPVP 227 The following BLAST results are available for this feature:
BLAST of CK933311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933311 ID=CK933311; Name=CK933311; organism=Citrus sinensis; type=EST; length=944bpback to top |