CK933311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSJ (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica GN=Os08g0548900 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.404e-23 Identity = 58/173 (33.53%), Postives = 94/173 (54.34%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD--RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 YD ++T FSPDG +FQ+EYA +AV +G++ D +V+GVEK K+ S R+I S+ H +A AGL AD R ++ RA+ E ++ +P+ V+ + + +A T +RPFG ++ G+D + P LY +PSG + A G+ + + +EK Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEK 176
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.404e-23 Identity = 58/173 (33.53%), Postives = 94/173 (54.34%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD--RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 YD ++T FSPDG +FQ+EYA +AV +G++ D +V+GVEK K+ S R+I S+ H +A AGL AD R ++ RA+ E ++ +P+ V+ + + +A T +RPFG ++ G+D + P LY +PSG + A G+ + + +EK Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEK 176
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.404e-23 Identity = 60/176 (34.09%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 68 GTGYDLSVTTFSPDGRVFQIEYAAKAVDNSG-TVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFG-CGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 G GYD +T FSP+GR+FQ+EYA KAV +G T IG++ KD + + +K + K++ S + + ++ G+ G+ AD R +V +A++EA + YG +PV L++ +A + T + ++RP G +ILG + GPQL+ +P+G + + + G Q A +EK Sbjct: 6 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEK 181
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.834e-23 Identity = 62/176 (35.23%), Postives = 100/176 (56.82%), Query Frame = 2 Query: 68 GTGYDLSVTTFSPDGRVFQIEYAAKAVDNSG-TVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFG-CGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 G GY+ +T FSP+GR+FQ+EYA KAV +G T IG++ KD I + K + K++ S + + ++ G+ G+ AD R +V +A++EA + YG +PV LA+ +A + T + ++RP G ++LG D GPQLY +P+G + + + G Q A +EK Sbjct: 6 GGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEK 181
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA7_CICAR (Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.395e-23 Identity = 57/173 (32.95%), Postives = 94/173 (54.34%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD--RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 YD ++T FSPDG +FQ+EYA +AV +G++ D +V+GVEK +K+ S R+I ++ H +A AGL AD R ++ RA+ E ++ +P+ V+ + + +A T +RPFG ++ G+D P LY +PSG + A G+ + + +EK Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDTRSVRKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEK 176
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 4.086e-23 Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD--RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 YD ++T FSPDG +FQ+EYA +AV +G++ D +V+GVEK K+ S R+I S+ H +A AGL AD R ++ RA+ E ++ + + V+ + + +A T +RPFG ++ G+D D P LY +PSG + A G+ + + +EK Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEK 176
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 4.086e-23 Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD--RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 YD ++T FSPDG +FQ+EYA +AV +G++ D +V+GVEK K+ S R+I S+ H +A AGL AD R ++ RA+ E ++ + + V+ + + +A T +RPFG ++ G+D D P LY +PSG + A G+ + + +EK Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEK 176
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA71_DROVI (Proteasome subunit alpha type-7-1 OS=Drosophila virilis GN=Pros28.1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.337e-23 Identity = 66/189 (34.92%), Postives = 105/189 (55.56%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK-LKLSEMTCRQGVIEVA 637 YD +VT FSPDGR+ Q+EYA +AV T +G++ + +V+GVEK +K+ + R+I V H MA AGL D R ++ RA+ E ++ +P+ ++ + + +A T RPFG ++GG+D DG P L+ EPSGI Y Y A G + + EK + E++ +G +++A Sbjct: 5 YDRAVTIFSPDGRLLQVEYAQEAVRKGSTAVGVRGGNCVVLGVEKKSVAKLQEDRTVRKI-CVLDHVVMAFAGL-TDARILINRAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSPYLFQTEPSGIFYEYKANATGCSAKTVREFFEKQYREEEVSTERGAVKLA 191
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA6_RAT (Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.970e-23 Identity = 59/174 (33.91%), Postives = 98/174 (56.32%), Query Frame = 2 Query: 74 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG-TVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 G+D +T FSP+GR++Q+EYA KA++ G T + ++ KD V+ +K + K++ + + + + G + G+ AD R V RA+ EA N++ YG IPV L +R+A + T +RP GC +IL G D + GPQ+Y +P+G + A G + + + +EK Sbjct: 8 GFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEK 181
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.970e-23 Identity = 58/176 (32.95%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 68 GTGYDLSVTTFSPDGRVFQIEYAAKAVDNSG-TVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 G GYD +T FSP+GR++Q+EYA KAV ++G T IG++ KD + + +K + K++ S + + ++ G+ GL AD R +V +A++EA + +G +PV LA+ +A + T + ++RP G ++ GYD + QL+ +P+G + + + G Q A +EK Sbjct: 6 GAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 181 The following BLAST results are available for this feature:
BLAST of CK933311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933311 ID=CK933311; Name=CK933311; organism=Citrus sinensis; type=EST; length=944bpback to top |