CK933311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA1_MOUSE (Proteasome subunit alpha type-1 OS=Mus musculus GN=Psma1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.459e-22 Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTC 613 YD VT +SP GR+ QIEYA +AV +G+K K V+ K S+ L ++I V H G+++AGL AD R + + E + V+ P+PV L + S + T + RP+G G+++ GYD GP ++ PS + +IG Q+A+T +E+ M C Sbjct: 6 YDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSE--LAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMEC 182
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA1_MACFA (Proteasome subunit alpha type-1 OS=Macaca fascicularis GN=PSMA1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.459e-22 Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTC 613 YD VT +SP GR+ QIEYA +AV +G+K K V+ K S+ L ++I V H G+++AGL AD R + + E + V+ P+PV L + S + T + RP+G G+++ GYD GP ++ PS + +IG Q+A+T +E+ M C Sbjct: 6 YDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSE--LAAHRKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMEC 182
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA1_HUMAN (Proteasome subunit alpha type-1 OS=Homo sapiens GN=PSMA1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.459e-22 Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTC 613 YD VT +SP GR+ QIEYA +AV +G+K K V+ K S+ L ++I V H G+++AGL AD R + + E + V+ P+PV L + S + T + RP+G G+++ GYD GP ++ PS + +IG Q+A+T +E+ M C Sbjct: 6 YDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSE--LAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMEC 182
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA1_BOVIN (Proteasome subunit alpha type-1 OS=Bos taurus GN=PSMA1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.459e-22 Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTC 613 YD VT +SP GR+ QIEYA +AV +G+K K V+ K S+ L ++I V H G+++AGL AD R + + E + V+ P+PV L + S + T + RP+G G+++ GYD GP ++ PS + +IG Q+A+T +E+ M C Sbjct: 6 YDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSE--LAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMEC 182
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA1_RAT (Proteasome subunit alpha type-1 OS=Rattus norvegicus GN=Psma1 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 4.518e-22 Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTC 613 YD VT +SP GR+ QIEYA +AV +G+K K V+ K S+ L ++I V H G+++AGL AD R + + E + V+ P+PV L + S + T + RP+G G+++ GYD GP ++ PS + +IG Q+A+T +E+ M C Sbjct: 6 YDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSE--LAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMQC 182
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.706e-22 Identity = 56/173 (32.37%), Postives = 92/173 (53.18%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD--RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 YD ++T FSPDG +FQ+EYA +AV +G++ D +V+ VEK K+ S R+I S+ H +A AGL AD R ++ +A+ E ++ +P+ V+ + + +A T +RPFG ++ G+D P LY +PSG + A G+ + + +EK Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEK 176
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA72_DROME (Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster GN=Pros28.1A PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 1.006e-21 Identity = 61/189 (32.28%), Postives = 100/189 (52.91%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLS-EMTCRQGVIEVA 637 Y ++T FSPDG + Q+EYA +AV T +G++ + +V+GVEK S+M + R+I + RH +A AGL AD R ++ R + E ++ + + ++ + + +A T RPFG ++GG D DG +L+ EPSGI + Y A G+ + EK E+T + I++A Sbjct: 5 YGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLA 193
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.314e-21 Identity = 56/176 (31.82%), Postives = 97/176 (55.11%), Query Frame = 2 Query: 71 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMM-LPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD--RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 +GYD +++ FSPDG +FQ+EYA +AV +G+K K+ +V+G E+ K+ + ++ + H ++ +GL AD R ++ +A+ EA ++ +P+ V+ L + VA T +RPFG ++ G+D D P+LY EPSGI + IG+ + + +EK Sbjct: 2 SGYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEK 177
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA4_MOUSE (Proteasome subunit alpha type-4 OS=Mus musculus GN=Psma4 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.717e-21 Identity = 63/218 (28.90%), Postives = 113/218 (51.83%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMM-LPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK-LKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNR 721 YD T FSP+GR++Q+EYA +A+ ++GT +GI DG+++ E+ K++ + +I+ ++ +VAG+ +D + + A Y Y EPIP ++L + T + RPFG ++ G+D+ G QLY +PSG + IG AA + +++ K EMT + + K++ D +K A ++E++ + ES + Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIATLTRESGK 222
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA4_SCHPO (Probable proteasome subunit alpha type-4 OS=Schizosaccharomyces pombe GN=SPAC13C5.01c PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.242e-21 Identity = 55/150 (36.67%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMM-LPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSG 520 YD T FSP+GR++Q+EYA +A++++G +GI KDGIV+ EK + SK++ S +++ + + AVAGL AD ++ A+ Y + E +P ++L +RV T Y LRPFG + G+D G QL+ PSG Sbjct: 5 YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSG 154 The following BLAST results are available for this feature:
BLAST of CK933311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933311 ID=CK933311; Name=CK933311; organism=Citrus sinensis; type=EST; length=944bpback to top |