CK933311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5_ENCCU (Probable proteasome subunit alpha type-5 OS=Encephalitozoon cuniculi GN=PUP2 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.607e-19 Identity = 59/200 (29.50%), Postives = 109/200 (54.50%), Query Frame = 2 Query: 86 SVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAA----KTEIEKLKLSEMTCRQGVIEVAKII 646 SV T+S +GR+ QIEYA KA++ T IG++ K+ +++ EK I S + P S + + ++ H + +G++ D + IV R++ ++ +YGE I V +R+ Y+ +L + + RPFG +I+ G+D + P+LY ++PSG Y AIG G + + E E+ + + R+ + ++K++ Sbjct: 7 SVNTYSSEGRIHQIEYAMKAMNLGTTTIGVRTKEFVILCSEKKILSTLQNPKSVVKHYKIYDHIVLGFSGISGDTKTIVKRSRDFCISHTHMYGENISV----ERLLKYLSSLSLRFGEEDEAKMIFRRPFGVSLIIAGFDTE-PRLYSLDPSGSYISYKAKAIGSGHEVVEGILENEYEEYSGLDQSLRKVLCTLSKVM 201
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA4_DROME (Proteasome subunit alpha type-4 OS=Drosophila melanogaster GN=Pros29 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 2.099e-19 Identity = 62/188 (32.98%), Postives = 102/188 (54.26%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISY---------RYFGAAIGKGRQ-AAKTEIEKLKLSE 604 YD T FSP+GR++Q+EYA +A+ ++GT +GI +DGI++ E +K++ + +I+ ++ + +VAG+ +D + + + A Y+ YGE IP ++L + T Y RPFG ++ G+D + G QLY +PSG +Y FGAAI +Q A E KL L++ Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQSDPSG-NYGGWKATCIGNNFGAAISMLKQELADKENVKLTLAD 191
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA4L_DROME (Proteasome subunit alpha type-4-like OS=Drosophila melanogaster GN=Prosalpha3T PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.675e-19 Identity = 55/172 (31.98%), Postives = 87/172 (50.58%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 +D T FSP+GR++Q+EYA +A SGT +G+ K+G+++ E+ + M RI ++ + G ADG +V + + A Y+ +GE IP ++L + T Y RPFG + G+D R G QLY +PSG + IG+ AA ++K Sbjct: 5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQK 176
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_ENCCU (Probable proteasome subunit alpha type-3 OS=Encephalitozoon cuniculi GN=PRE10 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.042e-18 Identity = 60/215 (27.91%), Postives = 101/215 (46.98%), Query Frame = 2 Query: 92 TTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKV 736 T ++ G++ Q+ YA KA D+ T IG+K K G+V+ EK S + + S+ +I + G+ G+++D + K +++ + E + + H T LR G + Y L + SG + Y A IGKG + KTE+EKL + MT + V K++Y HD +KDK F++E+ E+ +K+ Sbjct: 8 TIYTTTGQIDQLSYAQKAADSGDTCIGMKSKHGVVLLAEKPRVSPLYILESDEKIRKIGNTIGVVCTGMSSDTFYVGCAIKDYVFHHKENFNEDPTPGMMKVYLNDIFHYFTRGINLRVLGANTLTSVYKDGSFSLLHTDCSGKTLSYKAACIGKGTRRIKTELEKLDIDTMTIEEMVDVGVKVLYMAHDPSKDKEFDIEIGIASMETGGDLRKL 222
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA1_YEAST (Proteasome component PRE5 OS=Saccharomyces cerevisiae GN=PRE5 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.320e-18 Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 YD TFSP GR+FQ+EYA +A+ +G++ V+ K A + L ++I H G+++AGLA D R + + + V+ + V+ + T + RP+G G+++ GYD+ G L +PSG +G AIG Q AKT +E+ Sbjct: 6 YDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADE--LSSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLER 174
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA4_ENCCU (Probable proteasome subunit alpha type-4 OS=Encephalitozoon cuniculi GN=PRE9 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 5.007e-13 Identity = 54/202 (26.73%), Postives = 90/202 (44.55%), Query Frame = 2 Query: 95 TFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIV-MGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK-LKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEM 694 TF+ +GR+ Q+E+A K V +GT+IG C DG+V MGV K + G +I+ + + GL D ++ A+ +A +G P+ L + V T Y RPFG + G L +PSG S R+ G G+ +A ++ EM + +E+ +++ + +A LE+ Sbjct: 10 TFTDEGRLPQVEFAIKNVSRAGTIIGYVCSDGVVLMGVNKEPTN-----GPMEKIYQLSDSIYCVLCGLFGDAMELKRYARIKAQEVLERFGVECPLTTLCKFVGQRKQAFTQYAGTRPFGVSFLYAGVIDGKYALMSTDPSGTSNRWKGMCYGENEEAINRGLKNDFPEDEMDMKTATVEILRLLGKARELGPKEADRLEI 206 The following BLAST results are available for this feature:
BLAST of CK933311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933311 ID=CK933311; Name=CK933311; organism=Citrus sinensis; type=EST; length=944bpback to top |