CK933311

Overview
NameCK933311
Unique NameCK933311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5_ENCCU (Probable proteasome subunit alpha type-5 OS=Encephalitozoon cuniculi GN=PUP2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.607e-19
Identity = 59/200 (29.50%), Postives = 109/200 (54.50%), Query Frame = 2
Query:   86 SVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAA----KTEIEKLKLSEMTCRQGVIEVAKII 646
            SV T+S +GR+ QIEYA KA++   T IG++ K+ +++  EK I S +  P S  + + ++ H  +  +G++ D + IV R++    ++  +YGE I V    +R+  Y+   +L +         + RPFG  +I+ G+D + P+LY ++PSG    Y   AIG G +      + E E+    + + R+ +  ++K++
Sbjct:    7 SVNTYSSEGRIHQIEYAMKAMNLGTTTIGVRTKEFVILCSEKKILSTLQNPKSVVKHYKIYDHIVLGFSGISGDTKTIVKRSRDFCISHTHMYGENISV----ERLLKYLSSLSLRFGEEDEAKMIFRRPFGVSLIIAGFDTE-PRLYSLDPSGSYISYKAKAIGSGHEVVEGILENEYEEYSGLDQSLRKVLCTLSKVM 201          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA4_DROME (Proteasome subunit alpha type-4 OS=Drosophila melanogaster GN=Pros29 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.099e-19
Identity = 62/188 (32.98%), Postives = 102/188 (54.26%), Query Frame = 2
Query:   77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISY---------RYFGAAIGKGRQ-AAKTEIEKLKLSE 604
            YD   T FSP+GR++Q+EYA +A+ ++GT +GI  +DGI++  E    +K++     + +I+ ++ +   +VAG+ +D   + +  +  A  Y+  YGE IP ++L   +       T Y   RPFG  ++  G+D + G QLY  +PSG +Y           FGAAI   +Q  A  E  KL L++
Sbjct:    5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQSDPSG-NYGGWKATCIGNNFGAAISMLKQELADKENVKLTLAD 191          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA4L_DROME (Proteasome subunit alpha type-4-like OS=Drosophila melanogaster GN=Prosalpha3T PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.675e-19
Identity = 55/172 (31.98%), Postives = 87/172 (50.58%), Query Frame = 2
Query:   77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589
            +D   T FSP+GR++Q+EYA +A   SGT +G+  K+G+++  E+ +   M       RI  ++ +      G  ADG  +V + +  A  Y+  +GE IP ++L   +       T Y   RPFG   +  G+D R G QLY  +PSG    +    IG+   AA   ++K
Sbjct:    5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQK 176          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA3_ENCCU (Probable proteasome subunit alpha type-3 OS=Encephalitozoon cuniculi GN=PRE10 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.042e-18
Identity = 60/215 (27.91%), Postives = 101/215 (46.98%), Query Frame = 2
Query:   92 TTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKV 736
            T ++  G++ Q+ YA KA D+  T IG+K K G+V+  EK   S + +  S+ +I  +    G+   G+++D   +    K    +++  + E      +   +    H  T    LR  G   +   Y      L   + SG +  Y  A IGKG +  KTE+EKL +  MT  + V    K++Y  HD +KDK F++E+     E+    +K+
Sbjct:    8 TIYTTTGQIDQLSYAQKAADSGDTCIGMKSKHGVVLLAEKPRVSPLYILESDEKIRKIGNTIGVVCTGMSSDTFYVGCAIKDYVFHHKENFNEDPTPGMMKVYLNDIFHYFTRGINLRVLGANTLTSVYKDGSFSLLHTDCSGKTLSYKAACIGKGTRRIKTELEKLDIDTMTIEEMVDVGVKVLYMAHDPSKDKEFDIEIGIASMETGGDLRKL 222          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA1_YEAST (Proteasome component PRE5 OS=Saccharomyces cerevisiae GN=PRE5 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.320e-18
Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 2
Query:   77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589
            YD    TFSP GR+FQ+EYA +A+      +G++     V+   K  A +  L    ++I     H G+++AGLA D R +    + +      V+   + V+     +       T  +  RP+G G+++ GYD+ G  L   +PSG     +G AIG   Q AKT +E+
Sbjct:    6 YDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADE--LSSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLER 174          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA4_ENCCU (Probable proteasome subunit alpha type-4 OS=Encephalitozoon cuniculi GN=PRE9 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.007e-13
Identity = 54/202 (26.73%), Postives = 90/202 (44.55%), Query Frame = 2
Query:   95 TFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIV-MGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK-LKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEM 694
            TF+ +GR+ Q+E+A K V  +GT+IG  C DG+V MGV K   +     G   +I+ +       + GL  D  ++   A+ +A      +G   P+  L + V       T Y   RPFG   +  G       L   +PSG S R+ G   G+  +A    ++      EM  +   +E+ +++    +    +A  LE+
Sbjct:   10 TFTDEGRLPQVEFAIKNVSRAGTIIGYVCSDGVVLMGVNKEPTN-----GPMEKIYQLSDSIYCVLCGLFGDAMELKRYARIKAQEVLERFGVECPLTTLCKFVGQRKQAFTQYAGTRPFGVSFLYAGVIDGKYALMSTDPSGTSNRWKGMCYGENEEAINRGLKNDFPEDEMDMKTATVEILRLLGKARELGPKEADRLEI 206          
The following BLAST results are available for this feature:
BLAST of CK933311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
PSA5_ENCCU1.607e-1929.50Probable proteasome subunit alpha type-5 OS=Enceph... [more]
PSA4_DROME2.099e-1932.98Proteasome subunit alpha type-4 OS=Drosophila mela... [more]
PSA4L_DROME4.675e-1931.98Proteasome subunit alpha type-4-like OS=Drosophila... [more]
PSA3_ENCCU1.042e-1827.91Probable proteasome subunit alpha type-3 OS=Enceph... [more]
PSA1_YEAST2.320e-1830.41Proteasome component PRE5 OS=Saccharomyces cerevis... [more]
PSA4_ENCCU5.007e-1326.73Probable proteasome subunit alpha type-4 OS=Enceph... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004287_A11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933311 ID=CK933311; Name=CK933311; organism=Citrus sinensis; type=EST; length=944bp
GGGGGAAAGAGGATCGAATTGACTCACAAATCGAAAAAGAAAGAAGAGAG
CAAGAATGAGCAGCATAGGCACAGGCTACGATCTGTCGGTGACCACATTC
TCTCCCGACGGTCGCGTTTTCCAGATCGAATACGCCGCCAAAGCCGTCGA
CAACAGCGGGACTGTGATTGGAATTAAATGCAAAGATGGCATCGTTATGG
GAGTGGAGAAGCTAATAGCGTCGAAGATGATGTTGCCTGGTTCCAATAGA
AGAATCCATTCCGTTCATCGTCACTCCGGCATGGCTGTTGCAGGATTAGC
AGCAGATGGGAGACAAATTGTTACCAGGGCCAAGTCTGAAGCTACAAACT
ATGAAAGTGTATATGGCGAACCAATTCCTGTTAAAGAACTTGCTCAACGA
GTTGCTAGCTATGTGCATCTATGTACTCTATATTGGTGGCTCAGACCTTT
TGGATGTGGTGTAATTCTTGGAGGTTATGACAGAGATGGACCGCAATTGT
ATATGATTGAACCTTCTGGTATCTCCTATAGGTATTTTGGAGCTGCAATT
GGAAAGGGCAGGCAGGCTGCTAAAACAGAGATTGAAAAGTTGAAGCTTTC
TGAAATGACCTGCCGACAAGGGGTCATTGAAGTAGCCAAGATCATTTATG
GAGTGCACGATGAGGCTAAGGACAAGGCCTTTGAACTGGAAATGAGCTGG
GTCTGTGATGAATCAAACCGCCAGCATCAGAAGGTACCAGATGAGCTTCT
TGAGGAAGCTAAGGCAGCCGCCAGAGCAGCGTTGGAAGAGATGGATGCAG
ATTAGTGTAGCAGAGTTGATAATATTTGGTTACTAGTTTGATGCCATTTC
AGGGCTTGTCTTGGAATACTTTTCGAAACATTTTCAAAATATTTANNNAG
ATTGGTGGATTCTCTTAAAAAAAAAAAAANNNAAANNNANAAAA
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