CK933311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.335e-33 Identity = 77/211 (36.49%), Postives = 113/211 (53.55%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYW------------WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKD 673 YD V TFSP+GR+FQ+EYA +A+ T IG+K KD +V+GVEK + S +M S ++ + H G A++GL AD R I+ A+ + N+ Y EP ++ Q + C L RPFG +++ G D GPQLY EPSG +RY AIG G + AK+E+ K +MT + + + K++ V +E D Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSI------CDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQVMEEKLD 212
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.356e-33 Identity = 67/184 (36.41%), Postives = 108/184 (58.70%), Query Frame = 2 Query: 74 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGV 625 GYD ++T FSPDGR+FQ+ YA +AV T +G+KC +G+V+ VEK I S+++ P S +I + H A +G+ AD R +V RA+ EA + YGEP P+ + +++ + T Y +RPFG +++ G + + P+LY +PSG + + AIG GR A E+ +M+ + + Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVN-EKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAI 191
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.688e-33 Identity = 69/172 (40.12%), Postives = 103/172 (59.88%), Query Frame = 2 Query: 74 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 GYD ++T FSPDGR+FQ+ YA +AV T +G+K KDG+V+ VEK I SK++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP+P+ L +++ T Y +RPFG +++ G + + P+L+ +PSG + + AIG GR A E+ Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVN-EKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEE 179
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.688e-33 Identity = 69/172 (40.12%), Postives = 103/172 (59.88%), Query Frame = 2 Query: 74 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589 GYD ++T FSPDGR+FQ+ YA +AV T +G+K KDG+V+ VEK I SK++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP+P+ L +++ T Y +RPFG +++ G + + P+L+ +PSG + + AIG GR A E+ Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVN-EKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEE 179
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 9.703e-33 Identity = 72/188 (38.30%), Postives = 110/188 (58.51%), Query Frame = 2 Query: 74 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVA 637 GYD ++T FSPDGR+FQ+ YA +AV T +G+K K G+V+ VEK I S+++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP+P+ L +++ T Y +RPFG +++ G + + P+LY +PSG + + AIG GR A E+ S+ +G I++A Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVN-EKPELYETDPSGAYFEWKAVAIGSGRNTAMAIFEE-HYSDDIDMEGAIKLA 194
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.162e-32 Identity = 71/185 (38.38%), Postives = 107/185 (57.84%), Query Frame = 2 Query: 71 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGV 625 +GYD ++T FSP+GR++Q+EYA +AV T +GIKCKDG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA YGE I V+ LA+++ T + RPFG +++ G DR +L+ +PSG Y AIG GR A +E +MT +G+ Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVNEGM 192
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.687e-32 Identity = 74/223 (33.18%), Postives = 124/223 (55.61%), Query Frame = 2 Query: 71 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 + YD ++T FSP+GR++Q+EYA +AV T IGI CKDG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA Y YGE I ++ LA+++ T + +RPFG +++ G D++ +L+ +PSG Y AIG GR +EK ++T +G+ + +++ K + ++ + V D Q +K+P Sbjct: 7 SAYDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKNEARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANEDIKPENVDVCIITVKD---AQFKKIP 226
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.289e-32 Identity = 71/185 (38.38%), Postives = 106/185 (57.30%), Query Frame = 2 Query: 71 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGV 625 +GYD ++T FSP+GR++Q+EYA +AV T +GIKCKDG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA YGE I V+ LA+++ T + RPFG +++ G DR +L+ +PSG Y AIG GR A +E MT +G+ Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVNEGM 192
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.289e-32 Identity = 75/207 (36.23%), Postives = 114/207 (55.07%), Query Frame = 2 Query: 71 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDE 664 T YD V TFSP+GR+FQ+EYA +A+ T IG+K K+G+V+ VEK I S ++ P S +I + H G A++GL AD R +V A+ E N+ YGEP+ V+ Q LC L RPFG +++ G+D +GP LY +PSG ++ G AIG G + A + +++ ++T ++ I+ V +E Sbjct: 6 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA------LCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEE 206
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.289e-32 Identity = 74/207 (35.75%), Postives = 113/207 (54.59%), Query Frame = 2 Query: 71 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDE 664 T YD V TFSP+GR+FQ+EYA +A+ T IG+K KDG+V+ VEK + S ++ P S +I + H G A++GL AD R +V A+ E N+ YGEP+ V+ Q + C L RPFG +++ G+D +GP LY +PSG ++ AIG G + A + +++ E+T ++ I+ V +E Sbjct: 6 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAI------CDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVMEE 206 The following BLAST results are available for this feature:
BLAST of CK933311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933311 ID=CK933311; Name=CK933311; organism=Citrus sinensis; type=EST; length=944bpback to top |