CK933311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 8.214e-32 Identity = 71/185 (38.38%), Postives = 106/185 (57.30%), Query Frame = 2 Query: 71 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGV 625 +GYD ++T FSP+GR++Q+EYA +AV T +GIKCKDG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA YGE I V+ LA+++ T + RPFG +++ G DR +L+ +PSG Y AIG GR A +E MT +G+ Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGM 192
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.073e-31 Identity = 78/222 (35.14%), Postives = 119/222 (53.60%), Query Frame = 2 Query: 74 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 739 GYD ++T FSPDGR+FQ+EYA +AV T +GIK DG+V+ V+K I S+++ S +I + H G A +GL AD R +V RA+ EA Y EPI V+ +++++ + T Y +RP+G +++ G D + P+L+ +PSG Y AIG GR A E +M ++ +Y E K A LE+ V + + + VP Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNLPRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDMNMDAAILLGMDALYRA-AEGKFDASTLEVGIVSLQDKKFRKLVP 228
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.830e-31 Identity = 77/216 (35.65%), Postives = 116/216 (53.70%), Query Frame = 2 Query: 74 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNR 721 GYD ++T FSPDGR+FQ+EYA +AV T +GIK DG+V+ V+K I S+++ S +I + H G A +GL AD R +V RA+ EA Y EPI V+ +++++ + T Y +RP+G +++ G D + P+L+ +PSG Y AIG GR A E +M ++ +Y E K A LE+ V E + Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAAILLGMDALYKA-AEGKFDAGTLEVGVVSLEDKK 220
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.121e-31 Identity = 70/185 (37.84%), Postives = 107/185 (57.84%), Query Frame = 2 Query: 71 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGV 625 +GYD ++T FSP+GR++Q+EYA +AV T +GIKCKDG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA YGE I V+ LA+++ T + RPFG +++ G DR +L+ +PSG Y AIG GR A +E+ M+ +G+ Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENMSVSEGM 192
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 4.077e-31 Identity = 74/207 (35.75%), Postives = 113/207 (54.59%), Query Frame = 2 Query: 71 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDE 664 T YD V TFSP+GR+FQ+EYA +A+ T IG+K K+G+V+ VEK I S ++ P S +I + H G A++GL AD R +V A+ E N+ YGEP+ V+ Q LC L RPFG +++ G+D +GP LY +PSG ++ AIG G + A + +++ ++T ++ I+ V +E Sbjct: 6 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA------LCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAVSILKQVMEE 206
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.954e-31 Identity = 72/184 (39.13%), Postives = 103/184 (55.98%), Query Frame = 2 Query: 74 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGV 625 GYD ++T FSPDGR+FQ+EYA +AV T IGIKC +GIV+ V+K S ++ S +I + H G A +GL AD R +V RA+ EA + Y EPI V L++++ + + T +RPFG +I+GG +L+ +PSG Y AIG GR AA E +M + + Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNGGVRPFGSALIIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDDMNLNEAI 191
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 9.082e-31 Identity = 73/207 (35.27%), Postives = 113/207 (54.59%), Query Frame = 2 Query: 71 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDE 664 T YD V TFSP+GR+FQ+EYA +A+ T IG+K K+G+V+ VEK I S ++ P S +I + H G A++GL AD R +V A+ E N+ YGEP+ V+ Q LC L RPFG +++ G+D +GP LY +PSG ++ AIG G + A + +++ +++ ++ I+ V +E Sbjct: 6 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA------LCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSILKQVMEE 206
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.549e-30 Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = 2 Query: 71 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGV 625 +GYD ++T FSP+GR++Q+EYA +AV T +GIKC DG+V+ V++ I SK++ S +I + H A +GL AD R ++ RA+ EA YGE I V+ LA+++ T + RPFG +++ G DR +L+ +PSG Y AIG GR A +E M +G+ Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGM 192
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.549e-30 Identity = 79/213 (37.09%), Postives = 116/213 (54.46%), Query Frame = 2 Query: 77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTL------------YWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDK 676 YD V+TFSP+GR+FQ+EY+ +A+ T IGI K+G+V+GVEK S ++ S +I + RH G A++GL AD R ++ A++ A + Y E I V+ L Q V C L RPFG +++ G+D DG QL+ EPSG YRY AIG G + A+ E+ S +T ++ + V KI+ V +E D+ Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSV------CDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQVMEEKLDE 214
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.023e-30 Identity = 68/191 (35.60%), Postives = 108/191 (56.54%), Query Frame = 2 Query: 74 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKII 646 GYD ++T FSPDG ++Q++YA +AV T IGIK K G+V+ EK A ++ S ++ + H G + AGLA+DGR ++ A++ A + +Y EP+ + L + VA + T + +RPFG +++ G D+ P+LYM EPSG Y AIG+G A +EK ++T ++ K + Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKAL 199 The following BLAST results are available for this feature:
BLAST of CK933311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933311 ID=CK933311; Name=CK933311; organism=Citrus sinensis; type=EST; length=944bpback to top |