CK933311

Overview
NameCK933311
Unique NameCK933311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.894e-28
Identity = 67/173 (38.73%), Postives = 104/173 (60.12%), Query Frame = 2
Query:   74 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589
            GYD ++T FSPDG ++Q++YA +AV    T +G+K K G+V+  EK  A++++   S  ++  +  H G + AGLA+DGR ++  A+S+A  +  +Y EPI +  L + V+    + T +  +RPFG  +I+GG DR   P+L M EPSG    Y+  AIG+G   A    EK
Sbjct:    9 GYDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEK 181          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5_TRYBB (Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.473e-28
Identity = 75/218 (34.40%), Postives = 111/218 (50.92%), Query Frame = 2
Query:   56 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTL-----------YWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDK 676
            M S  T YD  V TFSP+GR+FQIEYA +A+    T +GI+  D +++  EK + S ++ P S  +I  +  H G  ++G+ AD R +V  A+ EA N+   Y EP+ V+  A      +  C L               RPFG  +++ G D +GPQL+  +PSG   RY   AIG G +AA+T   +     MT  +      +I+  V +E   K
Sbjct:    1 MFSSKTEYDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVDPSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCA------LATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVDENGPQLWQTDPSGTYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEEAENLTVQILRQVMEEKLTK 212          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.473e-28
Identity = 71/214 (33.18%), Postives = 117/214 (54.67%), Query Frame = 2
Query:   77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYV-----HLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 703
            YD  V TFSP+GR+FQ+EYA +A+    T IGI+  +G+ + VEK I S +M P S  +I  +  H G A++GL AD + ++ +A+ E  N+   Y E + V+ + Q V++                RPFG  ++ GG D  GPQL+ ++PSG   +    AIG   + A++ ++++    MT ++ +     I+  V +E K  A  +E++ V
Sbjct:    8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEE-KLNATNIELATV 220          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 2.473e-28
Identity = 71/214 (33.18%), Postives = 117/214 (54.67%), Query Frame = 2
Query:   77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYV-----HLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 703
            YD  V TFSP+GR+FQ+EYA +A+    T IGI+  +G+ + VEK I S +M P S  +I  +  H G A++GL AD + ++ +A+ E  N+   Y E + V+ + Q V++                RPFG  ++ GG D  GPQL+ ++PSG   +    AIG   + A++ ++++    MT ++ +     I+  V +E K  A  +E++ V
Sbjct:    8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEE-KLNATNIELATV 220          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.473e-28
Identity = 71/214 (33.18%), Postives = 117/214 (54.67%), Query Frame = 2
Query:   77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYV-----HLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 703
            YD  V TFSP+GR+FQ+EYA +A+    T IGI+  +G+ + VEK I S +M P S  +I  +  H G A++GL AD + ++ +A+ E  N+   Y E + V+ + Q V++                RPFG  ++ GG D  GPQL+ ++PSG   +    AIG   + A++ ++++    MT ++ +     I+  V +E K  A  +E++ V
Sbjct:    8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEE-KLNATNIELATV 220          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.473e-28
Identity = 72/211 (34.12%), Postives = 118/211 (55.92%), Query Frame = 2
Query:   77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 703
            YD   T FSP+GR++Q+EYA +A+ N+G+ IGI  KDG+V+  EK + SK++    S  +++ +  H   AVAG+ +D   ++  A+ +A  Y   Y EP+PV++L Q +       T +  LRPFG   +  G+D++ G QLYM +PSG    +   AIG   QAA++ +++    ++T    V    K +    D     + +LE++ V
Sbjct:    5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDDVTREDAVKLALKALSKTMDSTSLTSEKLELAEV 215          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.473e-28
Identity = 74/216 (34.26%), Postives = 112/216 (51.85%), Query Frame = 2
Query:   77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQ 724
            Y  S+TTFSP G++ Q+EYA  AV      +GI   +G+V+  E    S +    S  R+  ++ H GM  +G+  D R +V +A+  A  Y   Y EPIPV +L QRVA+ +   T    +RPFG  +++ G+D D P LY  +PSG  + +   A+GK     KT +EK + SE       +  A +      E K  A  +E+  +CD++  Q
Sbjct:    6 YSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEK-RYSEDLELDDAVHTAILTLKEGFEGKMTADNIEIG-ICDQNGFQ 219          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.473e-28
Identity = 71/207 (34.30%), Postives = 119/207 (57.49%), Query Frame = 2
Query:   77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMS 697
            Y  S+TTFSP G++ QIE+A +A  + G+ IGIK K+G+V+  EK + S + +  S ++I  +  + G+  AG+  D R ++ +A+ E+  Y   Y E IPV +L + +AS +   T    +RPFG  +++ G+D  GP LY ++PSG  + +   AIGK   ++KT +EK + S+    +  I+ A I      E +   F +E++
Sbjct:    5 YSFSLTTFSPSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLHSLVDVT-SVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEKGPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEK-RYSDDLEIEDAIQTALITIKEGFETQLTEFNMELA 209          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.230e-28
Identity = 65/173 (37.57%), Postives = 103/173 (59.54%), Query Frame = 2
Query:   74 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 589
            GYD ++T FSPDG ++Q++YA +AV    T +G+K K G+V+  EK  A++++      +I  +  H G   AGLA+DGR ++  A+S+A  +  +Y EPI ++ L + ++      T +  +RPFG  +I+GG D+   P+L M EPSG    Y+  AIG+G   A   +EK
Sbjct:    9 GYDRAITIFSPDGSLYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEK 181          
BLAST of CK933311 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.230e-28
Identity = 71/211 (33.65%), Postives = 117/211 (55.45%), Query Frame = 2
Query:   77 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 703
            YD   T FSP+GR++Q+EYA +A+ N+G+ +G+   DG+V+  EK + SK++    S  +++ +  H   AVAG+ +D   ++  A+  A  Y   Y EPIPV++L Q +       T +  LRPFG   +  G+D+  G QLYM +PSG    +  AA+G   QAA++ +++     +T  + V    K++    D     A +LE++ V
Sbjct:    5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEV 215          
The following BLAST results are available for this feature:
BLAST of CK933311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
PSMA_SULTO1.894e-2838.73Proteasome subunit alpha OS=Sulfolobus tokodaii GN... [more]
PSA5_TRYBB2.473e-2834.40Proteasome subunit alpha type-5 OS=Trypanosoma bru... [more]
PSA5_MOUSE2.473e-2833.18Proteasome subunit alpha type-5 OS=Mus musculus GN... [more]
PSA5_HUMAN2.473e-2833.18Proteasome subunit alpha type-5 OS=Homo sapiens GN... [more]
PSA5_BOVIN2.473e-2833.18Proteasome subunit alpha type-5 OS=Bos taurus GN=P... [more]
PSA4_SPIOL2.473e-2834.12Proteasome subunit alpha type-4 OS=Spinacia olerac... [more]
PSA2_DROME2.473e-2834.26Proteasome subunit alpha type-2 OS=Drosophila mela... [more]
PSA2_DICDI2.473e-2834.30Proteasome subunit alpha type-2 OS=Dictyostelium d... [more]
PSMA_SULAC3.230e-2837.57Proteasome subunit alpha OS=Sulfolobus acidocaldar... [more]
PSA4B_ORYSJ3.230e-2833.65Proteasome subunit alpha type-4-2 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004287_A11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933311 ID=CK933311; Name=CK933311; organism=Citrus sinensis; type=EST; length=944bp
GGGGGAAAGAGGATCGAATTGACTCACAAATCGAAAAAGAAAGAAGAGAG
CAAGAATGAGCAGCATAGGCACAGGCTACGATCTGTCGGTGACCACATTC
TCTCCCGACGGTCGCGTTTTCCAGATCGAATACGCCGCCAAAGCCGTCGA
CAACAGCGGGACTGTGATTGGAATTAAATGCAAAGATGGCATCGTTATGG
GAGTGGAGAAGCTAATAGCGTCGAAGATGATGTTGCCTGGTTCCAATAGA
AGAATCCATTCCGTTCATCGTCACTCCGGCATGGCTGTTGCAGGATTAGC
AGCAGATGGGAGACAAATTGTTACCAGGGCCAAGTCTGAAGCTACAAACT
ATGAAAGTGTATATGGCGAACCAATTCCTGTTAAAGAACTTGCTCAACGA
GTTGCTAGCTATGTGCATCTATGTACTCTATATTGGTGGCTCAGACCTTT
TGGATGTGGTGTAATTCTTGGAGGTTATGACAGAGATGGACCGCAATTGT
ATATGATTGAACCTTCTGGTATCTCCTATAGGTATTTTGGAGCTGCAATT
GGAAAGGGCAGGCAGGCTGCTAAAACAGAGATTGAAAAGTTGAAGCTTTC
TGAAATGACCTGCCGACAAGGGGTCATTGAAGTAGCCAAGATCATTTATG
GAGTGCACGATGAGGCTAAGGACAAGGCCTTTGAACTGGAAATGAGCTGG
GTCTGTGATGAATCAAACCGCCAGCATCAGAAGGTACCAGATGAGCTTCT
TGAGGAAGCTAAGGCAGCCGCCAGAGCAGCGTTGGAAGAGATGGATGCAG
ATTAGTGTAGCAGAGTTGATAATATTTGGTTACTAGTTTGATGCCATTTC
AGGGCTTGTCTTGGAATACTTTTCGAAACATTTTCAAAATATTTANNNAG
ATTGGTGGATTCTCTTAAAAAAAAAAAAANNNAAANNNANAAAA
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