CK934203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.507e-29 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLG G P Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFP 116 HSP 2 Score: 58.9214 bits (141), Expect = 1.507e-29 Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFS+G Sbjct: 108 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDG 142
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.507e-29 Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLG G P Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFP 115 HSP 2 Score: 58.151 bits (139), Expect = 1.507e-29 Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G FPE+L KNGVKFGEAVWFKAG+QIF+EG Sbjct: 107 LGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEG 141
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.507e-29 Identity = 40/47 (85.11%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLG G P Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115 HSP 2 Score: 60.8474 bits (146), Expect = 1.507e-29 Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPEILSKNGV FGEAVWFKAG+QIFSEG Sbjct: 107 LGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEG 141
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.510e-29 Identity = 42/47 (89.36%), Postives = 42/47 (89.36%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG G P Sbjct: 49 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 95 HSP 2 Score: 57.7658 bits (138), Expect = 1.510e-29 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEA WFKAG+QIFSEG Sbjct: 87 LGALGCVFPELLARNGVKFGEASWFKAGSQIFSEG 121
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.511e-29 Identity = 40/47 (85.11%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLG G P Sbjct: 41 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 87 HSP 2 Score: 60.8474 bits (146), Expect = 1.511e-29 Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPEILSKNGV FGEAVWFKAG+QIFSEG Sbjct: 79 LGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEG 113
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.515e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114 HSP 2 Score: 59.6918 bits (143), Expect = 1.515e-29 Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L+KNGVKFGEAVWFKAG+QIF EG Sbjct: 106 LGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEG 140
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.961e-29 Identity = 40/47 (85.11%), Postives = 40/47 (85.11%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPE FAKNRELEVIH RWAMLG G P Sbjct: 78 LTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFP 124 HSP 2 Score: 61.2326 bits (147), Expect = 1.961e-29 Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAGAQIFSEG Sbjct: 116 LGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 150
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.555e-29 Identity = 40/47 (85.11%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLG G P Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115 HSP 2 Score: 60.077 bits (144), Expect = 2.555e-29 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFKAG+QIFSEG Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 141
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 3.327e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFP 114 HSP 2 Score: 58.151 bits (139), Expect = 3.327e-29 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+L++NGVKFGEAVWFK G+QIFSEG Sbjct: 106 LGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEG 140
BLAST of CK934203 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.327e-29 Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 8 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGXXGGRLP 148 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG G P Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 116 HSP 2 Score: 58.5362 bits (140), Expect = 3.327e-29 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 3 Query: 123 LXXXGGVFPEILSKNGVKFGEAVWFKAGAQIFSEG 227 L G VFPE+ ++NGVKFGEAVWFKAG+QIFSEG Sbjct: 108 LGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEG 142 The following BLAST results are available for this feature:
BLAST of CK934203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934203 ID=CK934203; Name=CK934203; organism=Citrus sinensis; type=EST; length=227bpback to top |