CK934281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHMP3_XENTR (Charged multivesicular body protein 3 OS=Xenopus tropicalis GN=vps24 PE=2 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 5.546e-35 Identity = 73/173 (42.20%), Postives = 110/173 (63.58%), Query Frame = 1 Query: 220 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAV 738 P+ L+ +W K+R+E R I+RQIRDIQRE++ V+++IK++AK+ + + LA+E+V S+K VN+LY +KA MNS+ M + +A+ R G L KS EVMK + NL+K PE+ ATM++ SKEM KAG+IEE + D + D +D++L I + P V Sbjct: 12 PKDLVNEWSLKIRKEMRLIDRQIRDIQREQEKVKRSIKESAKKGNREACVILAKEVVHSKKAVNKLYASKAHMNSVLMSMKNQLAVLRVSGSLQKSTEVMKAMQNLVKIPEIQATMRDLSKEMMKAGIIEEMLEDTFEGMEDQDEMEEQAEMEIDRILFEITAGALGKAPSKV 184
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHMP3_DICDI (Charged multivesicular body protein 3 OS=Dictyostelium discoideum GN=chmp3 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.365e-32 Identity = 74/189 (39.15%), Postives = 115/189 (60.85%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAI--AGETAAQLP-EAVRKERVKQSAQ 768 KP P++L++ W+R+LR+E R ++ Q+R I +EK + IK+ K D SAK+LA+E+V SRK R+Y KAQMNS+SM L ++A+ + G+L KS E+MK++N+L+K PE+ M EMTKAG++EE ++D D + V+K++ I +G + P E ++E V Q Q Sbjct: 7 KPTPEELVKKWKRELRREDRGLDTQLRAIDMQEKKTVRMIKERVKAGDQKSAKTLAKEIVNSRKAKERIYTAKAQMNSVSMQLQSNLAMTKVQGNLAKSTEIMKMMNDLIKLPELNKVMMAMGSEMTKAGIMEEMISDVFD--MQGEDLEEEAEMEVNKIMDEILVSGPQVSSAPLETHQQEEVVQEKQ 193
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: VPS24_SCHPO (Vacuolar protein sorting-associated protein 24 OS=Schizosaccharomyces pombe GN=vps24 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 46/133 (34.59%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 214 PNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEE 612 P PQ+ R WQ +R+E R ++RQ+ ++ K + +K AK++D+++ + LA+E+ R+ + RL E+KA + S+S+ L + +A+ + G + S ++M+ V++L++ P+++ TM+ S E+TKAGV+EE Sbjct: 11 PTPQEQNRKWQSIIRKEQRQLDRQVYHLKAGRKKAEVQLKQLAKQSDITNMRILAKEIARANRHGKRLAESKALLGSLSLQLNDQMAMLKIQGTMQSSTKIMQDVSSLIRLPQLSETMRNLSMELTKAGVLEE 143
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: VPS2C_ARATH (Vacuolar protein sorting-associated protein 2 homolog 3 OS=Arabidopsis thaliana GN=VPS2.3 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.596e-20 Identity = 55/181 (30.39%), Postives = 96/181 (53.04%), Query Frame = 1 Query: 193 MNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEA 735 MN+ KPNP+++LR+ +R++ Q R IE++I +Q EEK + IK AK + + K LA++L+R R+ + L ++AQM I+ H A + + + M ++ M + A M+EF K+ + + E ++D++D ALD+ ++VL I + A+QL A Sbjct: 1 MNIFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAKQAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSSA 181
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: VPS24_YEAST (Vacuolar protein-sorting-associated protein 24 OS=Saccharomyces cerevisiae GN=VPS24 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.466e-19 Identity = 47/144 (32.64%), Postives = 91/144 (63.19%), Query Frame = 1 Query: 214 PNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALD 645 P+P++ R + LR+ RNIE+ +R++ + Q+ IK +AK+ND+ + + A+EL + K +R+Y ++AQ++S+ M + E++ + + SA +M+ VN+L++ P++ TM E KE+ K+G+I E V+D +++ D Sbjct: 11 PDPKEQQRRIRSVLRKNGRNIEKSLRELTVLQNKTQQLIKKSAKKNDVRTVRLYAKELYQINKQYDRMYTSRAQLDSVRMKIDEAIRMNTLSNQMADSAGLMREVNSLVRLPQLRNTMIELEKELMKSGIISEMVDDTMESVGD 154
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CM2A2_DICDI (Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum GN=chmp2a2 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.045e-18 Identity = 51/181 (28.18%), Postives = 94/181 (51.93%), Query Frame = 1 Query: 193 MNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEA 735 M + + P+++LR+ QR L + R I+R+ +Q +EK + IK AK+ M+SAK +A++LVR+R + + YE K Q+ ++S+ + + + + M +N M P+ M EF ++ K + EE +ND +D ++ +++VL I + A+QL +A Sbjct: 1 MFLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQFTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLASQLVDA 181
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: VPS2A_ARATH (Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana GN=VPS2.1 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 5.215e-17 Identity = 54/184 (29.35%), Postives = 97/184 (52.72%), Query Frame = 1 Query: 190 VMNMIKPK-PNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKS-AEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEA 735 +MN I K P +LLR+ +R L + R IER+ + +Q +EK + IK AK+ M + K +A++L+R+R + + Y+ K+Q+ +S+ + +++ + +G K + M +N M P + MQEF ++ K ++ E + DA+D AL+ V +VL I + +L A Sbjct: 1 MMNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELVNA 183
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2B_CHICK (Charged multivesicular body protein 2b OS=Gallus gallus GN=CHMP2B PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.895e-17 Identity = 54/189 (28.57%), Postives = 94/189 (49.74%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSR 777 K ++++ R+LR R I R ++++E+ ++ IK AK + + K LA++LV+ RK NR Y +++ S+S + + G ++ +A+ M+ VN M + TMQ F KE K + EE +ND +D D+ V++VL I E + ++ +A R SA TS+ Sbjct: 7 KKTVDDIIKEQNRELRGTQRTITRDRAALEKQERQLELEIKKMAKTGNKEACKVLAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDIVNQVLDEIGIEISGKMAKAPSAARGLPSASTSK 195
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: VPS2B_ARATH (Vacuolar protein sorting-associated protein 2 homolog 2 OS=Arabidopsis thaliana GN=VPS2.2 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.380e-16 Identity = 51/181 (28.18%), Postives = 89/181 (49.17%), Query Frame = 1 Query: 193 MNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEA 735 MN+ K K P+ LR +R++ R IER+I +Q EEK + IK AK + ++ K LA++LVR R+ + L ++AQ+ ++ H A + + + M +N M + A +++F K+ + + E +++A+D LD ++VL I A+QL A Sbjct: 1 MNIFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSA 181
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CH2BA_XENLA (Charged multivesicular body protein 2b-A OS=Xenopus laevis GN=chmp2b-A PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.284e-15 Identity = 51/189 (26.98%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSR 777 K +++D ++L+ + R I R ++++EK ++ IK AK + + K LA++LV+ RK R Y +++ S+S + + G ++ +A+ M+ VN M + TMQ F KE K + EE +ND +D D+ V++VL I E + ++ +A + SA S+ Sbjct: 7 KKTVDDIIKDQNKELKGQQRAITRDRTALEKQEKQLEMEIKKMAKAGNKDACKVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASEDEEESQDIVNQVLDEIGIEISGKMAKAPSAAKGLPSASASK 195 The following BLAST results are available for this feature:
BLAST of CK934281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934281 ID=CK934281; Name=CK934281; organism=Citrus sinensis; type=EST; length=886bpback to top |