CK934281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: VP241_ARATH (Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana GN=VPS24-1 PE=2 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 2.994e-89 Identity = 173/226 (76.55%), Postives = 192/226 (84.96%), Query Frame = 1 Query: 190 VMNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSRXXXXXXXXXXXXXXXKELEEIRARLXKVRS 867 VMN+IKPKP+P+QLLRDWQRKLRQECRNIERQIRDIQ+EE+NVQKAIK+AAKRNDM SAK+LA+E+V SR+TVNRLYENKAQMNSISMHLGESVAIARTVGHL+KSAEVMKLVNNLMKAP++AATMQEFSKEMTKAGVIEEFVN+A+D ALDS VDKVLTAIAGETAA+LP AVRKER+K AQ + +ELEEIRARL KVRS Sbjct: 4 VMNIIKPKPDPKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMVSAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPQMAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAAELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: VP242_ARATH (Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis thaliana GN=VPS24-2 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.981e-60 Identity = 125/198 (63.13%), Postives = 149/198 (75.25%), Query Frame = 1 Query: 274 IERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSRXXXXXXXXXXXXXXXKELEEIRARLXKVRS 867 I+ + DI+REE+NV KAIKD+ KRND+ +AK+LA+E+V SR+TV RLYENKAQ+NSISMHLGES+A A TVG+L+KS EVMKLVN+LMKAPE+A TMQ FSKEMTK GVIEEFV+DAVD ALDS VDKVLTAIAGETAA+LPEAVRK+++ AQ + +ELE IR RL VRS Sbjct: 3 IKSLLSDIEREERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVDNALDSEDIEEEIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEGVDAEEELEAIRYRLANVRS 200
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHMP3_RAT (Charged multivesicular body protein 3 OS=Rattus norvegicus GN=Vps24 PE=1 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36 Identity = 74/173 (42.77%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 220 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAV 738 P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+E SKEM KAG+IEE + D ++ D +D++L I + P V Sbjct: 12 PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKV 184
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHMP3_PONAB (Charged multivesicular body protein 3 OS=Pongo abelii GN=VPS24 PE=2 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36 Identity = 74/173 (42.77%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 220 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAV 738 P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+E SKEM KAG+IEE + D ++ D +D++L I + P V Sbjct: 12 PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKV 184
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHMP3_MOUSE (Charged multivesicular body protein 3 OS=Mus musculus GN=Vps24 PE=1 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36 Identity = 74/173 (42.77%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 220 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAV 738 P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+E SKEM KAG+IEE + D ++ D +D++L I + P V Sbjct: 12 PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKV 184
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHMP3_MACFA (Charged multivesicular body protein 3 OS=Macaca fascicularis GN=VPS24 PE=2 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36 Identity = 74/173 (42.77%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 220 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAV 738 P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+E SKEM KAG+IEE + D ++ D +D++L I + P V Sbjct: 12 PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIRATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKV 184
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHMP3_BOVIN (Charged multivesicular body protein 3 OS=Bos taurus GN=VPS24 PE=2 SV=4) HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36 Identity = 74/173 (42.77%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 220 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAV 738 P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+E SKEM KAG+IEE + D ++ D +D++L I + P V Sbjct: 12 PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKV 184
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHMP3_HUMAN (Charged multivesicular body protein 3 OS=Homo sapiens GN=VPS24 PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 5.016e-36 Identity = 74/173 (42.77%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 220 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAV 738 P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+E SKEM KAG+IEE + D ++ D +D++L I + P V Sbjct: 12 PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKV 184
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHMP3_XENLA (Charged multivesicular body protein 3 OS=Xenopus laevis GN=vps24 PE=2 SV=3) HSP 1 Score: 149.443 bits (376), Expect = 2.489e-35 Identity = 73/173 (42.20%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 220 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAV 738 P+ L+ +W K+R+E R I+RQIRDIQRE++ V+++IK++AK+ + + LA+E+V+S+K VN+LY +KA MNS+ M + +A+ R G L KS EVMK + NL+K PE+ ATM+E SKEM KAG+IEE + D + D +D++L + + P V Sbjct: 12 PKDLVNEWSLKIRKEMRVIDRQIRDIQREQEKVKRSIKESAKKGNREACVILAKEVVQSKKAVNKLYASKAHMNSVLMSMKNQLAVLRVSGSLQKSTEVMKAMQNLVKLPEIQATMRELSKEMMKAGIIEEMLEDTFEGMEDQDEMEEQAEMEIDRILFEVTAGALGKAPSKV 184
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHMP3_DANRE (Charged multivesicular body protein 3 OS=Danio rerio GN=vps24 PE=2 SV=3) HSP 1 Score: 149.443 bits (376), Expect = 2.489e-35 Identity = 73/173 (42.20%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 220 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAV 738 P+ L+ +W K+R+E R I+RQIRDIQREE+ V+++IKDAAK+ LA+E+++S++ +N+LY +KAQMNS+ + + +++ R G L KS EVMK + +L+K PE+ ATM++ SKEM KAG+IEE + D ++ D VDK+L I + P V Sbjct: 12 PKDLINEWSLKIRKEMRVIDRQIRDIQREEEKVKRSIKDAAKKGQKDVCIILAKEMIQSKRAINKLYASKAQMNSVLLSMKNQLSVLRVAGALQKSTEVMKAMQSLVKIPEIQATMRDLSKEMMKAGIIEEMLEDTLEGMDDEEEMEEAAEAEVDKILFEITAGALGKAPSKV 184 The following BLAST results are available for this feature:
BLAST of CK934281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934281 ID=CK934281; Name=CK934281; organism=Citrus sinensis; type=EST; length=886bpback to top |