CK934281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2A_DANRE (Charged multivesicular body protein 2a OS=Danio rerio GN=chmp2a PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14 Identity = 41/161 (25.47%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVL 693 + P+++LR QR L + R+++R+ + ++++EK + IK AK+ M + K +A++LVR+R+ V + +A + ++S+ + + + + M +N +K P++ M EF ++ + EE +NDA+D A+ V +VL Sbjct: 8 RKTPEEMLRQNQRALNRAMRDLDRERQRLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVL 168
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2A_CHICK (Charged multivesicular body protein 2a OS=Gallus gallus GN=CHMP2A PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14 Identity = 46/166 (27.71%), Postives = 86/166 (51.81%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHL-----GESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVL 693 + P++LLR QR L + R ++R+ + ++ +EK + IK AK+ M + K +A++LVR+R+ V + +A + ++S+ + S+A+A + + M +N +K P++ M EF K+ + EE +NDA+D A+ V +VL Sbjct: 8 RKTPEELLRQNQRALTRAMRELDRERQKLEAQEKKIIIDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFITMRANVQAVSLKIQTLKSNNSMALA-----MKGVTKAMATMNRQLKLPQIQKIMMEFEKQAGIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVL 168
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2A_MOUSE (Charged multivesicular body protein 2a OS=Mus musculus GN=Chmp2a PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.678e-13 Identity = 45/168 (26.79%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMK-------LVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVL 693 + P++LLR QR L + R ++R+ + ++ +EK + IK AK+ M + + +A++LVR+R+ V + +A + ++S+ + +T+ N A+ MK +N +K P++ M EF ++ + EE +NDA+D A+ V +VL Sbjct: 8 RKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKI-------QTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVL 168
BLAST of CK934281 vs. ExPASy Swiss-Prot
Match: CHM2A_HUMAN (Charged multivesicular body protein 2a OS=Homo sapiens GN=CHMP2A PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.678e-13 Identity = 45/168 (26.79%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 211 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMK-------LVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVL 693 + P++LLR QR L + R ++R+ + ++ +EK + IK AK+ M + + +A++LVR+R+ V + +A + ++S+ + +T+ N A+ MK +N +K P++ M EF ++ + EE +NDA+D A+ V +VL Sbjct: 8 RKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKI-------QTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVL 168 The following BLAST results are available for this feature:
BLAST of CK934281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934281 ID=CK934281; Name=CK934281; organism=Citrus sinensis; type=EST; length=886bpback to top |