CK934395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_ACOGR (DNA-directed RNA polymerase subunit beta OS=Acorus gramineus GN=rpoB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 597 DGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 DGN GM TIPG +QIQFEGFCRF+DQGL EE +KFPKIEDTD Sbjct: 4 DGNEGMFTIPGFSQIQFEGFCRFVDQGLMEEFHKFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_LEMMI (DNA-directed RNA polymerase subunit beta OS=Lemna minor GN=rpoB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.534e-14 Identity = 36/45 (80.00%), Postives = 38/45 (84.44%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 ML DGN GM TIPG +QIQFEGFCRFI+QGL EE KFPKIEDTD Sbjct: 1 MLRDGNEGMFTIPGFSQIQFEGFCRFINQGLMEEFNKFPKIEDTD 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_OLIPU (DNA-directed RNA polymerase subunit beta OS=Olimarabidopsis pumila GN=rpoB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 37/45 (82.22%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDG G STIPG NQIQFEGF RFIDQGL EEL KFPKIED D Sbjct: 1 MLGDGKEGTSTIPGFNQIQFEGFYRFIDQGLIEELSKFPKIEDID 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_NASOF (DNA-directed RNA polymerase subunit beta OS=Nasturtium officinale GN=rpoB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 37/45 (82.22%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDG G STIPG NQIQFEGF RFIDQGL EEL KFPKIED D Sbjct: 1 MLGDGKEGTSTIPGFNQIQFEGFYRFIDQGLIEELSKFPKIEDID 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_LOBMA (DNA-directed RNA polymerase subunit beta OS=Lobularia maritima GN=rpoB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 37/45 (82.22%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDG G STIPG NQIQFEGF RFIDQGL EEL KFPKIED D Sbjct: 1 MLGDGKEGTSTIPGFNQIQFEGFYRFIDQGLIEELSKFPKIEDID 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_LEPVR (DNA-directed RNA polymerase subunit beta OS=Lepidium virginicum GN=rpoB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 37/45 (82.22%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDG G STIPG NQIQFEGF RFIDQGL EEL KFPKIED D Sbjct: 1 MLGDGKEGTSTIPGFNQIQFEGFYRFIDQGLIEELSKFPKIEDID 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_DRANE (DNA-directed RNA polymerase subunit beta OS=Draba nemorosa GN=rpoB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 37/45 (82.22%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDG G STIPG NQIQFEGF RFIDQGL EEL KFPKIED D Sbjct: 1 MLGDGKEGTSTIPGFNQIQFEGFYRFIDQGLIEELSKFPKIEDID 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_CRUWA (DNA-directed RNA polymerase subunit beta OS=Crucihimalaya wallichii GN=rpoB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 37/45 (82.22%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDG G STIPG NQIQFEGF RFIDQGL EEL KFPKIED D Sbjct: 1 MLGDGKEGTSTIPGFNQIQFEGFYRFIDQGLIEELSKFPKIEDID 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_BARVE (DNA-directed RNA polymerase subunit beta OS=Barbarea verna GN=rpoB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 37/45 (82.22%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDG G STIPG NQIQFEGF RFIDQGL EEL KFPKIED D Sbjct: 1 MLGDGKEGTSTIPGFNQIQFEGFYRFIDQGLIEELSKFPKIEDID 45
BLAST of CK934395 vs. ExPASy Swiss-Prot
Match: RPOB_ARAHI (DNA-directed RNA polymerase subunit beta OS=Arabis hirsuta GN=rpoB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 37/45 (82.22%), Postives = 37/45 (82.22%), Query Frame = 3 Query: 588 MLGDGNAGMSTIPGLNQIQFEGFCRFIDQGLTEELYKFPKIEDTD 722 MLGDG G STIPG NQIQFEGF RFIDQGL EEL KFPKIED D Sbjct: 1 MLGDGKEGTSTIPGFNQIQFEGFYRFIDQGLIEELSKFPKIEDID 45 The following BLAST results are available for this feature:
BLAST of CK934395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934395 ID=CK934395; Name=CK934395; organism=Citrus sinensis; type=EST; length=724bpback to top |